Sphingopyxis alaskensis: Sala_2378
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Entry
Sala_2378 CDS
T00361
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sala_2378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_2378
Enzymes [BR:
sal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sala_2378
DNA repair and recombination proteins [BR:
sal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sala_2378
Prokaryotic type
Sala_2378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABF54087
UniProt:
Q1GQI5
LinkDB
All DBs
Position
complement(2499373..2500077)
Genome browser
AA seq
234 aa
AA seq
DB search
MAEVKLHPDWLARIGGEFAQPYMAALKQFLADERAKGKTIYPRPRDWFAALDATPPDAVR
VVILGQDPYHGPGQAHGLCFSVQPGVRLPPSLVNIYKELRSDLGIAPAPHGHLAHWARQG
VLLLNNCLTVEAGQAASHQGKGWEKFTDAAVAAVAADPAPKVFILWGSHAQKKAANVPGL
GAGSPHLILRAPHPSPLSAHNGFFGSRPFSQANAFLEAQGRGAIDWRLPDDPGA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcaaactgcatcccgactggctcgcgcgcatcggcggcgagtttgcgcag
ccctatatggcggcgctcaagcagttcctcgccgacgagcgcgcgaagggcaagaccatc
tatccgcgcccgcgcgactggttcgcggcattggacgcgacgccgccggacgcggtgcgc
gtcgtgattttggggcaggacccctatcacgggccggggcaggcgcatgggctttgcttt
tcggtccagcccggcgtgcgcctgccgccgagcctggtcaacatctacaaggaattgcgc
agcgacctgggtatcgcacccgcgccgcacggccacctggcgcattgggcacggcagggg
gtgctgctgctcaacaattgcctgacggtcgaggcggggcaagcggcgtcgcatcagggc
aagggatgggaaaagttcaccgacgccgcggtcgccgcggtcgccgccgacccggcgccc
aaggtgttcatcctgtggggcagccatgcgcagaagaaggcggcgaatgtgccggggctg
ggcgcgggcagtccgcacctgattctgcgcgcgccgcacccctcgccattgtcggcgcat
aacggctttttcgggtcgcggccgttcagccaggccaatgcctttctggaggcgcagggg
cgcggcgcgatcgactggcggctgcccgacgatcccggcgcatga
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