Sphingopyxis alaskensis: Sala_2525
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Entry
Sala_2525 CDS
T00361
Name
(GenBank) transcriptional regulator, LuxR family
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
sal
Sphingopyxis alaskensis
Pathway
sal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sala_2525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sal03000
]
Sala_2525
Transcription factors [BR:
sal03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
Sala_2525
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_20
HTH_28
HTH_10
HTH_23
Sigma70_ECF
HTH_11
HTH_5
PF0610-like_N
HTH_29
HTH_38
Sigma70_r3
HTH_Crp_2
HTH_40
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABF54232
UniProt:
Q1GQ40
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All DBs
Position
2661658..2662488
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AA seq
276 aa
AA seq
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MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRM
GFDHFALAFDRRGTGEPASILVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHV
DRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTCSFAVRPHADIPADMLHAAEI
LGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggttcgcggcgatagttggagcggaccgcaggcgagcgggtcgggaacgcgc
cggcggccgatgaacgatgtgaagcattattatctgacagaggaactcgcacaggaattt
acaggagcagacagagaagagcagctctttgccgcactgaccaaggctgcgggccgaatg
gggttcgaccatttcgcgcttgctttcgatcggcgcggaaccggcgaaccggcgtcgatt
ctcgtgcacaattatcccgacgcctgggccaaggtctatgtcggcttcgatctcagcgga
accgatccgatccgccgcgctagcgagcgatcgctgaccggcttcgaatggcgccacgtc
gatcgctatattccgctgagccgcggcgaccgccaattgctgtcggtggcgcgcgatagc
ggcgtcggtgacggcttcacggttcctcgccatctgcccggcgaggcatcgggaacctgt
tccttcgcagtccgtccgcacgcggacattccggcggacatgctccacgccgccgaaatc
ctcggcgcgatcgccatcgcttcggcgcgtgagttgatcggctcctctcctttacggcca
cgcccgatacttaccgaacggcaacgcgaatgcgtgctctggtcggcgcgcggcaagacc
gccggcgagatcgccgatattctcgggatcagcgaagagacggtcgtgcgccacctcaag
atggcgcgcgagcgctattcggtgcattgccgctcgatgctgatcctgtgcgcgctgttc
gacgggctgatcggcttctcggacatctacgactggtggcgcccgaactga
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