Sphingopyxis alaskensis: Sala_2783
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Entry
Sala_2783 CDS
T00361
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sala_2783
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sal01007
]
Sala_2783
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sal03016
]
Sala_2783
Enzymes [BR:
sal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Sala_2783
Amino acid related enzymes [BR:
sal01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Sala_2783
Transfer RNA biogenesis [BR:
sal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sala_2783
Prokaryotic type
Sala_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
ABF54488
UniProt:
Q1GPD4
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All DBs
Position
2942987..2945383
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AA seq
798 aa
AA seq
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MKLTLDWLKDHLDGDFTVEDVVATLNRIGHEVEGVENPADKLAGFRVARVLTAEKHPQAD
KLQVLTVEAGPEVNAGAPLTIVCGAPNARAGLVGVLGLPGAVVPASGMALKVAAVRGVES
NGMMCSSRELELGDDHDGIIELPEDAPVGASFADYRGAGDPVIDISITPNRQDCMGVRGL
ARDLAAAGLGTLKPLDVPTITGDGAPATEIRTDDPEGCPAFYGRTISGVTNGTAPEWMRR
RLEAVGQRSISALVDISNYVMFDLGRPSHIYDRAKLSGPLVARRAKAGETVTALNGKDYT
LADTMTVIADDRGVHDIAGIMGGEHSGCSAATSDVLIEVAYFTPERIALTGQALGLTSDA
RSRFERGVDPAFLDDATAIVTAHVLAICGGTPSTVTRAGTPPVGVKTVDYDPALSATLGG
VVIAPERQKEILTALGFTVIEQGGRWRVQVPSWRRDIDGAADLVEEVTRIHGFDTIASVA
LPRADGVAKPTATAEQLLERRVRRAAAAAGFHEAVTWSFISEQEAAPFGGGDWSLANPIS
EELKVMRPSLLPGLLAAAARNQKRGADSIRLFEIGRRYLSDAEHPTLAVLMAGDKRARGW
QAGKAAPFDAFDAKAAALALLDAAGAPAERLQVMDAVSEGSIWHPGQSATLRLGPKAVLA
EFGALHPALTRHFDVGGPAMAVQIFLDAIPAKRASGPARAAFAPPALQSVRRDFAFLAPT
SLTAAELVRAIRGADKASIVDARLFDRFTGQGVPEGQVSLAVEVELQPMEKSFTDAELKA
IADKVVAAAAKVGAVLRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccctcgactggttaaaagaccacctcgacggcgatttcaccgtcgaagat
gtcgtcgccaccctcaaccgcatcggccacgaagtcgaaggcgtcgagaatcccgccgac
aagctcgccggtttccgcgtcgccagggtgctgaccgccgagaagcatccgcaggccgac
aagttgcaggtgctgaccgtcgaggcgggcccggaagtcaacgccggcgcgccgctgacc
atcgtgtgcggcgcccccaatgcgcgcgcggggctggtcggcgtgctcggcctgcccggc
gcggtcgtgcccgcaagcggcatggcgctgaaggtcgcggcggtgcgcggggtcgaatcg
aacggcatgatgtgctcgtcgcgcgaactggagctgggcgatgaccatgacgggatcatc
gaacttcccgaagacgcgcccgtcggcgcgagctttgccgattaccgcggcgcgggcgac
ccggtgatcgacatttcgatcaccccgaaccggcaggattgcatgggggtgcgcgggcta
gcgcgcgaccttgccgccgccgggctcggcacgctgaagccgctcgacgtcccgacgatc
accggcgacggcgcacccgcgaccgagatccggaccgacgatcccgaaggctgccccgcc
ttctacggccgcacgatcagcggcgtcaccaacggcaccgcccccgaatggatgcgccga
cgcctcgaagcggtcgggcaacgctcgatctcggcgctcgtcgacatcagcaattatgtg
atgttcgacctcggccgcccgagccatatctatgaccgcgccaagctgagcggtccgctc
gtcgcgcgccgcgccaaggcgggcgaaacggtcaccgcattgaacggcaaggactacacg
ctcgccgacacgatgacggtgatcgccgacgaccgcggcgtccacgacatagcgggcatc
atgggcggcgagcatagcgggtgcagcgcggcgacgagcgacgtgctgatcgaggtcgcc
tatttcacccccgaacgcatcgcgctgaccggacaggcgctgggcctgacgagcgatgcg
cgcagtcgcttcgagcgcggggtcgatccggcgttcctcgacgatgcgaccgcgatcgtc
accgcgcatgtgctggcgatctgcggcggcaccccgtcgacggtcacgcgcgcgggcacg
ccgcccgtcggggtcaagacggtcgattacgaccccgcgctgtcggcgacgctcggtggt
gtcgtcatcgcgcccgaacggcagaaggaaatcctgaccgcgctgggcttcaccgtcatc
gaacagggcggccgctggcgggtccaggtgccgagctggcggcgcgacatcgatggcgcg
gccgatctggtcgaggaagtcacgcgcatccacggcttcgatacgatcgcgtcggtggcg
ctgccgcgcgccgatggcgtcgccaagccgaccgcgaccgccgaacagctgctcgaacgc
cgtgtgcgacgcgccgccgcggcagccggctttcacgaagcggtgacgtggagcttcatt
tccgaacaggaagccgcgcccttcggtggcggcgactggtcgctcgccaacccgatcagc
gaagagttgaaggtcatgcgcccgtcgctgctccccggcctgctcgccgcggcggcacgc
aaccagaagcgcggcgcggacagcatccgcctgttcgaaatcggccgccgctacctgtcc
gatgccgagcatccgacactcgccgtgctgatggcgggcgacaagcgcgcgcgcggatgg
caggcgggcaaggccgcgcccttcgatgcgttcgacgcgaaagccgcggcgctggcgctg
ctcgacgccgcgggcgcccccgccgagcgccttcaggtgatggacgcggtgagcgaaggc
agcatctggcaccccggccagtcggccaccctgcgcctcggccccaaggcggtgctcgcc
gaattcggcgcgctgcaccccgcgctgacgcgccatttcgacgtcggcggtccggcgatg
gcggtgcagatcttcctcgatgccattcccgccaagcgcgccagcggcccggcgcgcgcg
gcattcgcgcccccggccttgcagtcggtgcgccgcgactttgcgtttctggccccgacc
agcctgaccgccgccgaactggtccgcgcaatccgcggtgccgacaaggcgagcatcgtc
gatgcccgcctgttcgaccgcttcaccgggcagggcgtgcccgagggccaggtgagcctg
gcggtcgaggtcgaattgcagccgatggaaaaaagcttcaccgatgccgagttgaaggcg
attgccgacaaggtggtcgcagccgcggcgaaggtcggggcggtgctgcggggataa
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