Sphingopyxis alaskensis: Sala_2902
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Entry
Sala_2902 CDS
T00361
Name
(GenBank) RNA polymerase, sigma 28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
sal
Sphingopyxis alaskensis
Pathway
sal02020
Two-component system
sal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sala_2902
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sala_2902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sal03021
]
Sala_2902
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sal02035
]
Sala_2902
Transcription machinery [BR:
sal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sala_2902
Bacterial motility proteins [BR:
sal02035
]
Flagellar system
Flagellar assembly proteins
Stator
Sala_2902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ABF54607
UniProt:
Q1GP15
LinkDB
All DBs
Position
complement(3052440..3053186)
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AA seq
248 aa
AA seq
DB search
MRIEPAEQFAGAPGRALRPHGYGESVDALVTEYAPLVRKIAWQVFSRVSRTSELDDLIQT
GLIALIEASRHYEERGFAFATYASTRIRGAMIDQLRREADVGRSAMVAAKRLQATRAALE
QQLLRAPTAAEMAVALDMAAEDYFALERNATHGRSTSLDELTDIGAFLAADEDALADDRC
EQEDLMGALRQCVGRLSEREQLVLQLYFFEELNLHEIGLTLDVSAARICQIKREAMIKVE
RMMREMTD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgagcccgccgagcaatttgccggggcacccggccgcgcgctgcgcccgcac
ggatacggcgaaagcgtcgatgcgctggtgacggaatatgccccgctggtgcgcaagatc
gcgtggcaggtcttttcgcgcgtgtcgcgaacgagcgagctcgacgacctgatccagacc
gggctgatcgcgctgatcgaggcgagccgccattatgaagagcgcggctttgcctttgcc
acctatgcctcgacgcgcattcgcggcgcgatgatcgaccagctgcgccgcgaggcggac
gtcgggcggtcggcgatggtggcggcgaaacggcttcaggcgacgcgcgccgcgctcgaa
cagcaattgctgcgcgcgccgaccgcggccgaaatggcggttgcgctcgacatggcggcg
gaagattattttgcgctcgagcgcaatgcgacgcacggccgctcgacctcgctcgacgaa
ctcaccgacatcggcgccttcctcgcggccgacgaggatgcgctcgccgacgaccgctgc
gagcaggaggatctgatgggcgcgctgcgccagtgcgtcgggcggctgtccgagcgcgag
cagctggtgctccagctctatttcttcgaggaactgaacctccacgaaatcggcctgacg
ctcgacgtcagtgcggcgcgcatctgccagatcaagcgcgaggcgatgatcaaggtcgaa
cgcatgatgcgcgagatgaccgactag
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integrated database retrieval system
