Sphingopyxis alaskensis: Sala_3125
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Entry
Sala_3125 CDS
T00361
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sal02000
]
Sala_3125
Transporters [BR:
sal02000
]
Other transporters
Pores ion channels [TC:
1
]
Sala_3125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
NQRA_SLBB
Motif
Other DBs
NCBI-ProteinID:
ABF54828
UniProt:
Q1GNE4
LinkDB
All DBs
Position
3277319..3279676
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AA seq
785 aa
AA seq
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MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGR
SDEAEPVLSYDSEFFQRFEPLTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILIN
GERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDAVAGTINIELRDGFELDGGYV
RAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAI
SGPLPSGNLLTDNRNVNNIDQENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEID
FDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHDIQLVVGGFYQKKKRNTAILD
ADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRP
DFNFISPALLEEEVGDSDLLGNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLI
ELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLGFLGLPDTGLFGNVSWLDSEI
TDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLM
ARYAF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaactttcagcctgcgttccgccgccgctctcgccatcgtcgcggtgctcgcc
accgctcccgctgtcgcgcagccgacatccgccgacacggcgccgatccagcgcgacgag
ggcgacatcacgacctcgcaggacatcgtcgtcctcggcagcgtcggctatcggggccgc
agcgacgaggccgaacccgtcctttcatatgacagcgagtttttccagcgcttcgagccg
ctgaccgcaggcgatgcgctgaagcgcgtgccgtccgtcacctttctgtccgacgtcatc
gaaagcgacggtgcgcgccttcgcggcctgccgccgggctatacgcagatcctgatcaac
ggcgagcgcgtccccggcaacggcgacgaccgcagctttttcatggatcgcattcccgcc
gaactgatcgaccgcgtcgagatcctccgctcctcgtcggcgcgccgcacaggcgatgcc
gtcgcgggcacgatcaacatcgaactgcgcgacggttttgaactcgatggcggctatgtc
cgcgcgggcgcgctctatttcgacgatgaggaactcgaaccaagcctcggcctcgtctat
ggcgggaaagtcgggccgggccgcctgctcgtcgggctcaattttcagggtcgccacaat
ccgaagcggaagcgttcgctgcgctatggcgattcccccgagaacgatcccgatttccgg
gtcaacgagttcgacaatcgcgaggaccagagcgacacgcgcgacggcaaggattattcg
gccaacgccagctatgagatcgacggcgagaccaccggtttccggatcagcggcttctac
gtccgcaccgaccgcacggagaccgagcgcagcttcgaatatgacgatccgacggcgatc
agtggcccgctgcccagcggcaatctgttgaccgacaatcgcaacgttaacaatatcgat
caggaaaattacagcatcgacgccagattgtcgcacgattggtcgctcggcaagacgacg
ctgcgtctcggccatgcgcggttcgacgacaagcagcgcgagagcgagaatgagatcgat
ttcgacgtcgattatgacgatggcgaagtgccggtgttcgaacaggcgttcactgcgacc
gacatcgtcgacaaggaatacaccgccaagctcgaccatgagttcgaccttggtcacgac
atccagcttgtggtcggcggcttctatcagaagaaaaagcggaataccgcgatcctcgac
gcggacggcgaagaggattttccggggctcgaaaccagctatgaccagttcgccgatagt
cccgacgacctgctttcgcccttcgacccgctcgagccgaccgatggcggggtcagccgg
atcgaggaacgacgtctcgacggtttcgcgctggtgcagggcaaatcgggcgggctgacg
tgggaggcgggcatccgctatgaaaccacgcgcttcgacatcaccgacttcaccgaagcg
gcagcgattcccacgcagcgcaatgaatatgaaaaatggctgccgtcggcgtcggtcaag
ttcgacctgacctcgcgcgaccgcatcaccgcgtcggtcgcgcgcaccaaccgtcgcccc
gatttcaacttcatctcgcccgccctgctcgaagaagaagtcggcgacagcgacctgctc
ggcaatccgcaactcggtcccgaaaccgcctggggtttcgatctggggtatgagcgccgc
atcggtcgcaccggcatcgtcgggatcaatgccttctaccgcgacgtgaccgacctcatc
gaactgaccaacaccggcgaagaggggtcggaaggcgagggcactttcgtctaccagccg
cagaatgtcggcgacggcaaggtgtggggcgtcgagttcgatctttcgaccgacctcggt
ttcctcggcctgcccgacacgggccttttcggcaacgtctcgtggctcgacagcgagatc
accgattttgcgggcaagcgccgcttcaacggccagtcggactatgtctacaacatcggc
ttcgttcaggacatcccgcgctggggcgttgctttcggcgcgacgcaccgcaaacagggc
gcggcctatgaccgtgtgatcagcgaggaagtgcgcacgacctatggcgccgaccttgaa
atcttcgtcgaaaagcggatcggcagcaatttcacgatccgcgcggtcggatcgaacctg
ttgaacggagccaagcgcgaagtgttcaacaagttcgacaatctcgaagaccagcagaca
cgcgatttcgacgaatatgagctcgaaagcgaaaaggcggggccagtgttccagctgatg
gcgcgctacgccttttag
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