Salinibacterium sp. UTAS2018: ESZ53_03190
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Entry
ESZ53_03190 CDS
T05816
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sala
Salinibacterium sp. UTAS2018
Brite
KEGG Orthology (KO) [BR:
sala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sala03016
]
ESZ53_03190
Enzymes [BR:
sala01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ESZ53_03190
Transfer RNA biogenesis [BR:
sala03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ESZ53_03190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QAV69531
UniProt:
A0A410YGK4
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Position
662468..663727
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AA seq
419 aa
AA seq
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MSNASESAAPEGESHAATQAPHVPVDVIDDREEYLAAVEAIAAGHGPIGIDAERASGYRY
SQRAYLIQIFRRGAGTFLFDPPAIGDFTELNDVIAEEEWILHAATQDLTCLREVGLHPTR
LFDTELGARLSGLPRVGLGTVVEHLLGIHLAKEHSSADWSTRPLPQSWLVYAALDVELLV
DLREALGALLDNDGKSEIVRQEFESVLARDLSNVRAEPWRRLSGVHSIRAGKNLAVAREL
WLARDAYAQEVDTAPGRLVPDSALLAAAKTLPESKRQLSSLKEFRGRASRSQIDRWWDAI
QAGLSSTDIPATRVSSDTLPPPRVWSDKNPEADRRLKAARALMTEFSEEMSIPIENLLTP
DYLRRVSWNPPAEVSPESISEALTALGARPWQLDVSAQSIAQAFVEANQTPDDSDDAES
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacgcctccgagagtgcagcccccgagggcgagtcgcacgccgccacccaagcc
cctcacgttcccgtcgacgtcatcgacgaccgggaagaatatctcgctgcagtcgaggcc
atcgccgccggtcacggcccgatcggcatcgacgctgaacgcgccagcggctaccgctac
tcgcaacgtgcgtacctcatccagatattccgtcgtggagccggcaccttcctctttgac
ccgcccgctattggcgatttcacagagctgaacgatgtcatcgctgaagaagagtggatc
cttcacgcggctactcaagacctcacctgcttgcgtgaggttggcctgcaccccacccgc
cttttcgacactgagttgggagcccgcctctcgggccttccccgcgttggtctcggcacg
gtagtggagcatctcttgggcattcacctcgccaaggaacactcgtcggcggactggtcg
acacgtccactcccgcagtcatggctggtctacgccgcgttagacgtcgaacttctcgtt
gatcttcgcgaagcgctcggcgcactgctcgacaacgatggcaaaagcgagatagtccgc
caagaattcgaatccgtactcgcgcgcgacctcagcaatgtgcgggctgaaccttggcgc
cgcttgagcggagttcattcgattcgcgccggcaagaatctagctgtggcgcgggaactt
tggctggcacgcgacgcgtacgctcaagaagtcgatactgcccccggtcgcctcgtgccc
gactccgccttattggcagcggcgaagacacttccggaatcgaagcgtcagctttcaagc
ctgaaagagttccggggccgtgcaagccgttcacagatcgatcgatggtgggatgctatc
caggccgggctttcttctaccgacatccctgccacccgagtgtcgagcgatacattgcct
ccccctcgagtctggtcggataagaaccctgaagcagatcgccgtttgaaagccgctcgc
gctctcatgacggagttctccgaggagatgtctattcccatcgagaacttgttgacgccc
gactatcttcgtcgcgtctcctggaacccgccagcggaggtttcgcccgagagtatctcc
gaggccctgactgcgctcggagcgcgcccctggcaacttgacgtatctgcacagtcaatc
gctcaagcctttgtcgaagccaaccaaacccccgacgactccgacgacgcagagtcgtag
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