Salinibacterium sp. UTAS2018: ESZ53_07460
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Entry
ESZ53_07460 CDS
T05816
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sala
Salinibacterium sp. UTAS2018
Pathway
sala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESZ53_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sala03019
]
ESZ53_07460
03400 DNA repair and recombination proteins [BR:
sala03400
]
ESZ53_07460
Enzymes [BR:
sala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESZ53_07460
Messenger RNA biogenesis [BR:
sala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESZ53_07460
DNA repair and recombination proteins [BR:
sala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ESZ53_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
MGS
SLFN-g3_helicase
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
QAV70293
UniProt:
A0A410YIK3
LinkDB
All DBs
Position
1559742..1561943
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AA seq
733 aa
AA seq
DB search
MTDTRTEALTVLRTLVGNETADFHEGQFEAIETLVDGRRRALVVQRTGWGKSAVYFVSTL
LMRRRGAGPTVLVSPLLALMRDQIAAASRAGVRAVAINSTNPHEWAEVQQQLANDEVDVL
LVSPERLNNPSFRDNQLPALINRIGMLVVDEAHCISDWGHDFRPDYRRLRELIATMPAGV
PVLATTATANSRVVADIAAQLEGGASGGADGTAGVENPVGTTGAAENTAAAGTEVVTIRG
PLARASLRLGVLKLPDARARLGWLLSHLAELPGSGIIYTLTVSAAEDTARLLRDSGMDVR
AYTGKTDPQEREESEQALKNNTVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQV
GRAGRATDNADVLLMPGPEDRDIWEYFATSSMPDQANAELVISELTAAADSGAGPISTPA
LEARVNLRRSPLELLLKVLDVDGAVARVQGGWTATGQPWSYDAERYAGVTAARRAEQQNM
LDYEQLPAGTEGCRMEFLQRALDDDTATPCGRCDNCAGIWYPTDITTDATSRATATLDKV
GVPIEPRAQWPTGADKVGVPVRGRINPDQRSLEGRALARLTDLGWGGTLRTLFAPGTPDA
AASPALVAACVRVLADWGWDERPVAVVSMPSRRRPQLVASVAEALASAGKLPYLGSLSLT
GDGPQGEPGGNSAYRLASVWGQFEWAGGSELPRGPILLVDDLVDSRWTLTIAAKALRDAG
ADAVLPFALALRG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatacccgcactgaggccctgaccgttcttcgcacgcttgtcggcaatgagact
gccgattttcatgaggggcagtttgaggcgatcgagacgctcgtcgatgggcgccgccgg
gcgctcgtggtgcagcgcaccgggtggggaaagtccgccgtctacttcgtttccacgctg
ctcatgcgccggcgaggtgcggggcctaccgtgcttgtgtcgccactgctggcgctgatg
cgcgaccagattgccgcggcatcccgcgccggagttcgggccgtcgccatcaactccacc
aacccgcacgaatgggctgaagttcagcagcagctcgccaacgacgaagttgatgtgctg
ctcgtctcgcccgaacgcctcaacaaccccagctttcgagacaaccaactgcccgcactg
atcaaccgcatcgggatgctcgtcgtcgacgaagcgcactgcatcagcgactggggccac
gactttcgccccgactaccgccgcctgcgcgaactcatcgccaccatgcccgccggcgta
cccgtgctcgccaccaccgccaccgccaactctcgcgtcgtcgccgacatcgccgcgcag
ctcgaaggcggggcaagcggcggtgcagacggcaccgctggcgtcgaaaaccccgtaggc
accacaggtgccgccgaaaacacagccgcggcaggcaccgaagtcgtcaccatccgcgga
ccgctcgcgcgagcatccctgcggctgggcgtactgaaattgccggatgcccgcgcccgc
ctcggctggctactgagccacctcgccgaacttcccggcagcggtatcatctacacgctc
acagtgtcggccgccgaagacaccgcgcgactgctgcgcgatagcggcatggatgtgcgc
gcctacaccggcaaaaccgacccgcaagaacgcgaagagtccgagcaggcgctcaagaac
aacaccgtcaaagcgctcgtggccaccagtgccctcggcatgggattcgacaagcccgac
ctgggcttcgtcatccacctcggtgcgccttcttctcccgtcgcctactaccaacaggtg
ggccgtgccgggcgtgccaccgacaacgccgacgtgctgctgatgcccgggcccgaagac
cgcgacatctgggaatacttcgccacctcatccatgcccgaccaagccaatgccgaactc
gtgatctccgagcttaccgccgccgctgactctggcgccgggcccatctccacgcccgcg
ctcgaagcgcgcgtgaacctgcgccgcagtcccctcgaactgctgctcaaagtgttggat
gtcgacggtgccgtcgcccgcgtgcaaggcggctggaccgccaccggccagccctggagc
tacgacgccgaacgctacgccggagtcaccgccgcccgccgcgccgaacaacagaacatg
ctcgactacgaacaactccccgccggcaccgaaggctgccgcatggagtttctgcaacgc
gccctcgacgacgacaccgccaccccctgcggccgctgcgacaactgcgccggcatctgg
taccccaccgatatcaccacggatgccaccagccgcgccaccgccaccctcgacaaagtc
ggcgtccccatcgaaccccgcgcccaatggcccaccggagccgacaaagtcggcgtgccc
gtgcgcggacgcatcaaccccgaccaacgctccctcgaaggccgcgccctcgcccgcctc
accgacctcggctggggcggcaccttgcgcaccctcttcgcccccggcacccccgacgct
gccgcgagccccgcgctcgttgccgcctgcgtgcgcgtactcgccgactggggctgggat
gagcgacccgtcgccgtggtctccatgccgtcgcgccgccgcccacaactcgtggcatcc
gtcgccgaagccctcgccagcgccggcaagctcccctacctcgggtcgctctcgctcacc
ggtgacggaccacagggtgagcccggcggcaatagcgcctaccggctcgcgagtgtgtgg
gggcaattcgagtgggctggtggcagcgaactcccccgcggcccgatcttgctcgtcgat
gacctcgtcgactcccgctggaccctcacaatcgcggcgaaagcgctccgcgacgccggg
gcggatgccgtgctgccgttcgcgcttgccctgcgtgggtaa
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