Streptomyces albidoflavus: XNR_1078
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Entry
XNR_1078 CDS
T02545
Name
(GenBank) tRNA-i(6)A37 methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
salb
Streptomyces albidoflavus
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salb03016
]
XNR_1078
Enzymes [BR:
salb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
XNR_1078
Transfer RNA biogenesis [BR:
salb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
XNR_1078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
BAR
Motif
Other DBs
NCBI-ProteinID:
AGI87477
LinkDB
All DBs
Position
complement(1292597..1294138)
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AA seq
513 aa
AA seq
DB search
MSGNNVAGEVVDGEQTHAGGVKTYEVRTYGCQMNVHDSERLAGLLEGAGYVRSPEGTEEG
DADVVVFNTCAVRENADNRLYGNLGRLAPMKTRRPGMQIAVGGCLAQKDRDTITKRAPWV
DVVFGTHNIGKLPVLLERARVQEEAQVEIAESLEAFPSTLPTRRESAYAAWVSVSVGCNN
TCTFCIVPALRGKEKDRRTGDILAEVEALVAEGVSEITLLGQNVNAYGSDIGDRQAFSKL
LRACGKIEGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSY
RQERFLSIIEKVRAAIPDAAITTDIIVGFPGETEEDFQQTLHTVREARFAQAFTFQYSKR
PGTPAAEMDGQIPKEVVQERYMRLVALQEEISWEENKKQTGRVLEVMVAEGEGRKDGATR
RLSGRAPDNRLVHFTKPDEEVRPGDVVTVEITYAAPHHLLAEGTPLGVRRTRAGDAWERR
NAAPAPAPGVMLGLPTIGAPAPQPAPAGGCSTC
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaacaacgtggcgggcgaagtggtggacggcgagcagacgcacgcgggcggc
gtgaagacgtacgaggtgcgcacctacgggtgccagatgaacgtccacgactccgagcgg
ctcgccgggctgctggagggcgccgggtacgtccggtcccccgagggcaccgaggagggc
gacgcggacgtcgtcgtcttcaacacctgcgccgtccgggagaacgccgacaaccgcctc
tacggcaacctcggccggctcgccccgatgaagaccaggcggcccggcatgcagatcgcc
gtcggcggctgcctcgcccagaaggaccgcgacaccatcaccaagcgcgccccctgggtc
gacgtggtcttcggcacccacaacatcggcaagctgcccgtcctgctggagcgcgcccgc
gtccaggaggaggcgcaggtcgagatcgccgagtcgctggaagccttcccctccacgctg
ccgacccgccgggagagcgcctacgccgcctgggtctcggtctccgtcggctgcaacaac
acctgcaccttctgcatcgtccccgccctgcgcggcaaggagaaggaccgccggaccggc
gacatcctcgccgaggtggaggcgctggtcgccgagggcgtcagcgagatcaccctgctc
ggccagaacgtcaacgcctacggcagcgacatcggcgaccgccaggcgttctccaagctg
ctccgcgcctgcgggaagatcgagggcctggagcgggtccgcttcacctcgccgcacccg
cgcgacttcaccgacgacgtgatcgccgcgatggccgagacgcccaacgtcatgccgcag
ctgcacatgccgctccagtccggctcggacaccgtgctgcgggcgatgcgccgctcctac
cgccaggagcggttcctctccatcatcgagaaggtccgcgccgccatcccggacgccgcg
atcaccaccgacatcatcgtgggcttccccggcgagaccgaggaggacttccagcagacc
ctgcacacggtccgcgaggcccgcttcgcccaggcgttcaccttccagtactccaagcgt
cccggcacccccgccgccgagatggacgggcagatccccaaggaggtcgtccaggagcgg
tacatgcgcctggtcgcgctccaggaggagatctcctgggaggagaacaagaagcagacc
ggccgcgtcctggaggtcatggtcgccgagggcgagggccgcaaggacggcgccacccgg
cgcctctccggccgcgcccccgacaaccgcctcgtccacttcaccaagccggacgaggag
gtccgccccggcgacgtggtcaccgtggagatcacctacgccgccccgcaccacctgctc
gccgagggcaccccgctcggcgtccgccgcacccgcgcgggcgacgcctgggagcgccgc
aacgccgcccccgccccggcccccggtgtcatgctcggcctccccaccatcggcgccccc
gccccccagccggccccggcgggcggctgctccacctgctga
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