KEGG   Streptomyces albidoflavus: XNR_1100
Entry
XNR_1100          CDS       T02545                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
salb  Streptomyces albidoflavus
Brite
KEGG Orthology (KO) [BR:salb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salb03400]
    XNR_1100
Enzymes [BR:salb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XNR_1100
    5.6.2.6  RNA 3'-5' helicase
     XNR_1100
DNA repair and recombination proteins [BR:salb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    XNR_1100
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: AGI87499
LinkDB
Position
1313766..1318406
AA seq 1546 aa
MARSALDTFSPATRNWFTGAFSAPTAAQEGAWGAIAEGSDVLVVAPTGSGKTLAAFLSAL
DTLASTPPPAESRKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVRVGI
RSGDTPAAERRSLATRPPDILITTPESLFLMLTSSAREALEGVETVILDEVHAVAGTKRG
AHLALSLERLDELLPKPARRIGLSATVRPVDEVARFLSPQRRVEIVQPASGKEFDLSVVV
PVEDLGELGGSPVSDEGSGDRPSIWPHVEERIADLIQSHRSTIVFANSRRLAERLCNRLN
EIAYERATGEAMPEDHSPAELMGAASSASGAPPLIARAHHGSVSKEQRAQVEEDLKAGRL
PAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKYRGDL
VQSAVVTERMREGRIEALRVPSNPLDVLAQQIVAMTAMDTWQFDDLLALARRAAPFSSLP
ESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAVTSGGTIPDRGLFG
VFLAGADPKKGGGRVGELDEEMVYESRTGDVFTLGTTSWRIEDITRDRVLVSPAPGVPGR
LPFWKGDQLGRPLELGRALGAFVREVGALPEEDARLRLLAAGLDAWAAENLLTYLKEQRE
ACGHVPDDRTVVVERFRDELGDWRVVIHSPFGAQVHAPWALALGARLSERYGMDAQVMHA
DDGIVLRLPDADLLGLDLLDDEASDPGTAFDTEQSPVGAQDVTFDKGEIEGIVTDQVGSS
ALFASRFRECAARALLLPRRSPGKRTPLWQQRQRASQLLQVASEFGSFPIVLEAVRECLQ
DVFDVPGLTELMGDLEARRVRLVEVTTPEASPFARSLLFGYVAQFLYEGDSPLAERRAAA
LSLDSRLLSELLGQAELRELLDAEVLAELEQELQWRTEDRRIKDAEGVADALRVLGPLTS
AELAERGADPAWARELAGTRRVIEVRIASVEHWAAIEDAGRLRDALGVALPVGVPEAFTE
PVKDPLGDLLARYARTHGPFTAAAAAERFGLGRAVTEGALERLGASGRVVQGEFHPAGVG
QEWCDATVLRRLRRRSLAALRQELEPVEPTALARFLPPWQHLGGQGLRGLDGLVRAVEQL
QGAAVPASALEKLVLPSRVAQYQPAMLDELTATGELLWAGSGSLPGKDGWVSLYLADNAP
LLLPPPHPLELSPLHQAVLDALAGGYGLFFRQIADQVRAAHPTASDQALADAVWELAWSG
RLTNDTVAPLRALLGSGRTAGSTAHRARRSVPRGRFGALTAAPRPASRTGPPTVAGRWSL
LPPLEPDPTLRAHALARTLLDRHGVVTRGAVAAEGVEGGFSAVYRVLSAFEDSGQARRGY
VVEGLGAAQFAMDGAVDRLRASATAAEREAGGTPRQALVLAAADPANAYGAALPWPEPPS
GAGHKPGRKAGAMVVLVDGELAMYMERGGKTLLAWPSTTPDDPSAPDPRLEGAAHALAGS
AAGGSLGTVTVERINGEPALTSPVGTYLENAGFHATPRGLRLRGGR
NT seq 4641 nt   +upstreamnt  +downstreamnt
atggcacgctcagcgctcgacacgttctccccggcgacccggaactggttcaccggggcc
ttctcggcgcccaccgccgcccaggagggggcgtggggtgccatcgccgagggttcggac
gtgctggtggtggcgccgaccggttccggcaagacgctggcggccttcctctccgcgctg
gacacgctggcgtcgacgccgccgcccgccgagtcccgcaagcgctgccgggtgctgtac
gtctccccgctgaaggccctcgcggtggacgtggagcgcaatctgcgcagcccgctgacg
ggcatccggcaggagtcggtgcggctcgggctgccggagccggaggtgcgggtcggtatc
cgctcgggcgacaccccggcggcggagcggcgctcgctggcgacgcggccgccggacatc
ctcatcaccaccccggagtcgctcttcctgatgctgacctcctcggcgcgggaggcgctg
gagggggtggagacggtcatcctcgacgaggtgcacgcggtggcgggcaccaagcgcggc
gcccatctggcgctctccctggagcggctggacgagctgctgccgaagccggcccgccgg
atcgggctgtcggcgaccgtccggccggtggacgaggtggcgcggttcctgtcgccgcag
cgccgggtggagatcgtccagccggcctcgggcaaggagttcgacctgtcggtggtggtg
ccggtggaggatctgggcgagctgggcggctcgccggtgagcgacgagggctcgggcgac
cgcccctcgatctggccgcacgtcgaggagcgcatcgccgacctgatccagtcgcaccgc
tcgaccatcgtcttcgccaactcccgccgcctcgccgaacgcctgtgcaaccggctgaac
gagatcgcctacgagcgtgccaccggcgaggccatgcccgaggaccactccccggccgag
ctgatgggcgccgcctcgtcggcctcgggggcgcctcccctgatcgcccgcgcccaccac
ggttcggtctccaaggagcagcgcgcccaggtggaggaggacctgaaggcgggccggctg
cccgccgtggtggccacctccagcctggagctgggcatcgacatgggcgcggtggacctg
gtggtgcaggtcgagtccccgccgtcggtggcctcggggctccagcgggtggggcgcgcg
gggcaccaggtgggcgcggtctccacgggcgtggtcttcccgaagtaccggggcgacctg
gtgcagtcggcggtggtgacggagcggatgcgggagggccggatcgaggcgctgcgggtc
ccgtcgaacccgctggacgtgctggcccagcagatcgtggcgatgaccgcgatggacacc
tggcagttcgacgacctgctggcgctggcgcggcgggcggccccgttctcctcgctgccg
gagtcggcgttcaccgcggtgctggacatgctggcgggccgctatccctcggacgccttc
gccgagctgcgcccgcgcgtggtctgggaccgcgtcgcgggcaccgtgacgggccgcccg
ggggcgcagcggctcgccgtcacctccggcggcaccatccccgaccgcggcctgttcggc
gtcttcctggcgggcgcggacccgaagaagggcggcggccgggtcggcgagctggacgag
gagatggtctacgagtcgcgcaccggcgacgtcttcacgctgggcaccacctcgtggcgg
atcgaggacatcacccgcgaccgggtcctggtctcgccggcgccgggcgtgccggggcgg
ctgccgttctggaagggcgaccagctggggcgtccgctggagctggggcgggcgctgggc
gccttcgtccgggaggtcggggcgctgcccgaggaggacgcccggctgcggctgctggcc
gcggggctggacgcctgggcggcggagaacctcctgacgtacctgaaggagcagcgcgag
gcgtgcgggcacgtcccggacgaccggacggtggtcgtggagcggttccgggacgagctg
ggtgactggcgggtggtgatccactccccgttcggcgcgcaggtgcacgccccgtgggcg
ctggcgctgggggcgcgtctgagcgagcggtacggcatggacgcccaggtgatgcacgcc
gacgacgggatcgtgctgcgcctgcccgacgcggacctcctggggctggacctgctggac
gacgaggcgtcggacccgggcacggccttcgacaccgagcagtccccggtcggcgcccag
gacgtcaccttcgacaagggcgagatcgaggggatcgtcaccgaccaggtgggcagctcg
gcgctgttcgcctcgcggttccgggagtgcgcggcccgcgcgctgctgctgccgcgccgc
agccccggcaagcgcaccccgctgtggcagcagcggcagcgggcctcgcagctgctccag
gtggcgagcgagttcggctccttcccgatcgtcctggaggcggtccgcgagtgcctccag
gacgtcttcgacgtgccggggctgaccgagctgatgggcgacctggaggcccgccgcgtc
cgcctggtcgaggtgacgaccccggaggcgtcccccttcgcccgctccctgctcttcggg
tacgtggcgcagttcctgtacgagggggactcgccgctggccgagcggcgggcggcggcg
ctgtcgctggactcgcggctgctgtccgagctgctgggccaggccgagctgcgggagctg
ctggacgcggaggtcctggccgagctggagcaggagctccagtggcgcaccgaggaccgc
cggatcaaggacgcggagggggtcgccgacgcgctgcgggtgctcggtccgctgacctcg
gcggagctggcggagcgcggcgccgatccggcgtgggcgcgggagctggcgggcacgcgc
cgcgtcatcgaggtgcggatcgcctcggtggagcactgggcggcgatcgaagacgcgggg
cggctgcgcgacgcgctcggcgtggcgcttccggtgggggtcccggaggcgttcacggag
ccggtgaaggacccgctgggcgacctcctcgcccggtacgcccgcacccacggcccgttc
acggcggccgcggcggcggagcggttcggtctcgggcgggcggtcaccgagggggcgctg
gagcggctgggcgcgagcgggcgggtggtgcagggcgagttccatccggccggggtgggc
caggagtggtgcgacgcgacggtgctgcgccggctgcgccgccgttcgctggccgccctg
cgccaggagctggagccggtggagccgacggcgctggcccggttcctgccgccgtggcag
cacctgggcgggcaggggctgcgcggtcttgacgggctggtccgcgcggtggagcagctc
cagggcgcggcggtgccggcctccgcgctggagaagctggtgctgccgtcgcgggtggcg
cagtaccagccggcgatgctcgacgagctgacggccaccggggagctgctgtgggcgggc
agcggctcgctcccgggcaaggacggctgggtctcgctctacctcgcggacaacgccccg
ctcctgctgccgcccccgcacccgctggagctgtcgccgctgcaccaggcggtgctggac
gcgctcgccggcgggtacggcctcttcttccgccagatcgccgaccaggtccgggccgcc
catcccaccgcctccgaccaggcactggcggacgccgtctgggagctggcctggtcgggg
cggctcaccaacgacacggtggctccgctccgcgccctcctcggttcgggccgcaccgcc
gggtccacggcgcaccgggcgcgccgcagcgtcccccggggccggttcggcgcgctgacc
gccgcgccgcggcccgcctcgcggacgggcccgccgacggtcgcgggccgctggtcgctg
ctgcccccactcgaacccgatccgaccctgcgggcccacgccctggcccgcaccctcctc
gaccggcacggcgtcgtcacgcgcggcgcggtggcggcggagggcgtcgagggcggcttc
tccgccgtgtaccgcgtcctgtcggccttcgaggacagcgggcaggcccgccggggttac
gtggtggaggggctgggcgcggcccagttcgcgatggacggcgcggtggaccgcctgcgt
gcctccgcgaccgccgccgagcgggaggccggcggtacgccccggcaggccctggtcctg
gcggcggccgacccggccaacgcgtacggcgcggctctcccctggccggagccgccgagc
ggcgccgggcacaagccgggccgtaaggcgggggcgatggtcgtcctggtcgacggggag
ctggccatgtacatggagcgcggcggcaagaccctgctggcctggccctccaccaccccg
gacgacccctcggcccccgatccccgcctggagggagccgcccacgccctcgcgggttcg
gccgccggcggttccctcggcacggtcaccgtcgaacgcatcaacggcgagcccgccctg
acctccccggtcggcacctacctggagaacgcgggcttccacgcgacaccgagggggctg
cggctgcgcggcgggaggtga

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