Streptomyces albidoflavus: XNR_1130
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Entry
XNR_1130 CDS
T02545
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XNR_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salb03019
]
XNR_1130
03016 Transfer RNA biogenesis [BR:
salb03016
]
XNR_1130
Enzymes [BR:
salb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XNR_1130
Messenger RNA biogenesis [BR:
salb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XNR_1130
Transfer RNA biogenesis [BR:
salb03016
]
Prokaryotic type
tRNA degradation factors
XNR_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
AGI87525
UniProt:
A0A2A2UG77
LinkDB
All DBs
Position
complement(1355526..1357733)
Genome browser
AA seq
735 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFRKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALINGQWVGFPTHTELEDA
VFDMVVAGRVLDDGDVAIMMVEAEATEKTIQLVKDGAAAPTEEVVAAGLEAAKPFIKALC
KAQSELAAKAAKPTGEFPIFLDYQDDVLEALKAAVESELAQALTIGGKQEREAELDRVKA
VAAEKLLPQFEGREKEISAAYRALTKELVRRRVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEDEKDDASS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagaagcccaaggaccag
ctggacttcttcccgctgaccgtggacgtcgaggagcggatgtacgcggccgggaagatc
cccggttccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccggcccctgcgcccctccttccgcaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaacggccagtgggtcggcttcccgacccacaccgagctggaggacgcc
gtcttcgacatggtcgtcgccggccgtgtgctcgacgacggtgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagacgatccagctggtcaaggacggcgccgccgccccg
accgaagaggtcgtcgccgccggtctggaagccgccaagcccttcatcaaggcgctctgc
aaggcccagtccgagctggccgccaaggccgccaagcccaccggcgagttcccgatcttc
ctggactaccaggacgacgtgctcgaggccctcaaggccgccgtcgagtccgagctggcc
caggcgctgaccatcggtggcaagcaggagcgcgaggccgagctggaccgcgtcaaggcc
gtcgccgccgagaagctgctcccgcagttcgaaggccgcgagaaggagatctccgcggcc
taccgcgcgctgaccaaggaactggtccgccgccgcgtcatcaaggacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctcgacaccctctcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctggtcccggtcctgccg
acccgcgaggagttcccctacgcgatccgccaggtctccgaggccctcggctccaacggc
tccacgtcgatgggctccgtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgacggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggcaccaagaccttcgtcaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgcgacgcccgcctccac
atcctcgatgtgatgaacgaggccatcgacgtcccggacgagatgtcccccaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtcggcgcgaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctcgctg
atcccggtcatcgagggcgaggacgagaaggacgacgcctcctcgtga
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