KEGG   Streptomyces albidoflavus: XNR_1143
Entry
XNR_1143          CDS       T02545                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
salb  Streptomyces albidoflavus
Brite
KEGG Orthology (KO) [BR:salb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:salb03016]
    XNR_1143
Enzymes [BR:salb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     XNR_1143
Transfer RNA biogenesis [BR:salb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    XNR_1143
 Prokaryotic type
    XNR_1143
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AGI87537
UniProt: D6B9Z5
LinkDB
Position
complement(1377456..1378361)
AA seq 301 aa
MKQSSSVPDGLVVVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITASADASGIGRAAVDAGVAELTGDIMQV
PSKVSAIKIDGKRSYTRVREGEEFEIPARPVTVSSFTVYDVREDKAADGTPVLDLVVSVV
CSSGTYIRALARDLGASLGVGGHLTALRRTRVGPYGLDAAKTLEQLQEELTVMPVAEAAA
AAFPRWDLDERRAQLVLNGVRIDMPEEYAGRGPVGVFDPAGRCLALVEEQKGRAKSVAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagcagtccagctcggtgccggacggcctggtcgtcgtcgacaagccgtccggcttc
acctctcatgacgtcgtcgccaagatgcgcggcatcgcccggacccgccgcgtgggacac
gccggcaccctggaccccatggcgaccggggtcctcgtcctgggcgtggaacgcgccacc
aaactcctcggccacctcgcgctgacggagaaggagtacctgggcaccatccgcctcggc
cagaccaccgtcaccgacgacgccgagggcgagatcaccgcctcggcggacgcctccggc
atcggccgggcggccgtggacgccggggtcgccgagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacgggaaacggtcgtacacccgcgtccgcgag
ggcgaggagttcgagatcccggcccgcccggtcaccgtctcgtccttcaccgtctacgac
gtccgcgaggacaaggccgccgacggcacccccgtcctcgacctggtcgtctcggtcgtc
tgctcctcggggacgtacatccgggcgctcgcccgcgacctcggcgcctccctcggcgtc
ggcggccacctcaccgcgctgcggcgcacccgggtgggcccgtacgggctggacgcggcg
aagaccctcgaacagctccaggaggagctgaccgtgatgccggtcgccgaggcggccgcc
gcggccttcccgcgctgggacctcgacgagcggcgcgcgcagctcgtcctcaacggcgtg
cgcatcgacatgcccgaggagtacgcgggccgcggccccgtgggcgtcttcgacccggca
gggcgctgcctggccctggtcgaggagcagaaggggcgcgccaagagcgtcgccgtcttc
gcctga

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