Streptomyces albidoflavus: XNR_1619
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Entry
XNR_1619 CDS
T02545
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03420
Nucleotide excision repair
salb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XNR_1619
03430 Mismatch repair
XNR_1619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salb03400
]
XNR_1619
Enzymes [BR:
salb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XNR_1619
DNA repair and recombination proteins [BR:
salb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XNR_1619
MMR (mismatch excision repair)
Other MMR factors
XNR_1619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGI88005
LinkDB
All DBs
Position
complement(1916352..1919927)
Genome browser
AA seq
1191 aa
AA seq
DB search
MPARISDPEQLKELLGIPFTPEQMACVTAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALTEAGVTEPEPLAPPGAGPQDEHTPGEPVISTYH
AFAGRLLTDHGLRLGLEPSTRLLADATRFQLAARVLREAPGAHPALTRSFPDLVGDLLAL
DGELSEHLVTPDRLRHHDEDLLGTLESTPLTNPDLRKLPEVARARHDLAGLVEQYRSAKR
DRDLIDFGDQIALSATLADRHPAVGALLREEFRVVLLDEYQDTSVAQRILLAGLFGHGTG
HPVTAVGDPCQAIYGWRGASVANLDDFPDHFPHADGTPAARHSLSENRRSGGRLLDLANT
MAAPLRAMHTGVEALRPAPGAERDGIVRCALLDTHADELTWLADRIAHLVATGTPPGEIA
VLCRTAGDFGAIQSALVDRDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLL
TGPRWRIGPRDLALLGRRARLLVRRERAGGDDPDRRLAEAVEGVDPAEVISLADALDTFL
DGSADDELPFSAEARVRYAQLATELRDLRRSLADPLMDVLHRVLATTGLEVELSSSPQAL
AARRRETLSNFLDVAASFAAQEKDASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTA
HKSKGLEWDVVAVPGLVAKQFPSEQGREKWTAQPRVLPHSLRGDAATLPDAGALDSKGLK
AFTEQMRDHQHTEELRLGYVTFTRPRKLLLGSGHWWGPTQKRTRGPSDFLLALHDHCLAG
HGETEVWAERPDAAAQNPALAEPTADLAWPLPLDEVALDRRRAAAATVRAHLDALASGAL
ATSAIEEQAAPDAAVPAHPAPGEPDGPPEDLEPQPEDEESHEDGDWESWTTARPATTPPP
VAVTEAVTPATPAATYSAATEGPTPEEARLIHSWDQDLEALSGELLRARQGTRDVVLPAS
LTASELMRLAADPAGFAAELARPMPRPPQPAARRGTRFHAWVESRFEDVQLPMLDPEELP
GHDADIADEHDLEALKEAFEQTEYAHRTPLGVEVPFQLTLAGRTVRGRMDAVYRLESDTA
TGTGPQTPVYEIVDWKTSHTRDADPLQLAIYRLAWAEHHRLPLEAVTAAFVYIRTGETVR
PRHLPGRREIEHILLGTTPGPSPEQPPAPHGAPEPAQRTGEPPDRSAAAAR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgtatcagcgaccccgagcagctcaaggagctcctcggtatccccttcacc
ccggagcagatggcctgcgtcaccgcgccgcccgctccccaggtgatcgtcgcgggagcc
ggctcgggcaagaccacggtgatggcggcccgcgtcgtctggctcgtcggcaccgggcag
gtcgcgcccgaacaggtcctcgggctgaccttcaccaacaaggccgcgggcgaactcgcc
gaacgcgtccgcaaggcactgaccgaggccggcgtcaccgaacccgagccgctcgccccg
ccgggcgccggcccccaggacgagcacacccccggcgaaccggtcatctccacctaccac
gccttcgccggacggctcctcaccgatcacggactccggctcggactggaacccagcacc
cgcctgctcgccgacgccacccgcttccagctcgccgcccgggtgctgcgggaggcgccc
ggagcccaccccgcgctgacccgctccttccccgacctcgtcggcgacctgctcgccctc
gacggcgagctttccgaacacctcgtcacccccgaccggctgcgccaccacgacgaagat
ctgctcggcaccctggagagcaccccgctcaccaaccccgacctgcgcaaactccccgag
gtcgcccgcgcccgccacgacctcgccgggctcgtcgagcagtaccgcagcgccaaacgc
gaccgcgacctcatcgacttcggcgaccagatcgccctctccgccaccctcgccgaccgc
cacccggcagtcggcgccctgctccgcgaggagttccgggtcgtcctcctcgacgagtac
caggacacctccgtcgcccagcgcatcctgctcgccggactcttcggccacggcaccggc
caccccgtcaccgccgtcggcgacccctgccaggccatctacggctggcgtggcgcctcc
gtcgccaacctcgacgacttccccgaccacttcccccacgccgacggcacccccgccgcc
cgccactccctcagcgagaaccgccgcagcggaggccgcctcctcgacctcgccaacacc
atggccgccccgctgcgcgccatgcacaccggcgtcgaagcactgcgccccgcccccggc
gccgaacgcgacggcatcgtccgctgcgccctcctcgacacccacgccgacgagctgacc
tggctcgccgaccggatcgcccacctcgtcgccaccggaacaccgcccggcgagatcgcc
gtgctgtgccggaccgccggcgacttcggggcgatccagagcgctctggtcgaccgggac
gtcccggtcgaggtggtcggtctctccggcctcctccacctgccggaggtcgccgacctc
gtcgccgtctgcgaagtgctccaggaccccggtgccaacgcctccctggtccgcctcctc
accggcccccgctggcgcatcggcccgcgcgacctcgccctcctcggccgccgtgcccgg
ctcctggtacgccgtgagcgcgcgggcggcgacgaccccgaccggcggctcgccgaagcg
gtcgaaggtgtcgacccggccgaggtcatctccctcgccgacgccctcgacaccttcctc
gacggctccgccgacgacgagctgccgttctccgccgaggcccgcgtccggtatgcccag
ctcgccaccgaactccgcgacctgcgccgctccctcgccgacccgctcatggatgtcctg
caccgcgtcctcgccaccaccggcctcgaagtggaactctcctcctccccgcaggccctc
gccgcccgccgccgcgagacgctctccaacttcctggatgtcgccgcctccttcgccgcc
caggagaaggacgcctccctcctcgccttcctcggcttcctgcgcaccgcggcccagtac
gagaagggactcgacaacgccctccccggcggcgagaacaccgtcaaggtcctcaccgcc
cacaagtccaagggcctggagtgggacgtggtcgccgtccccggactggtcgccaagcag
ttcccgagcgagcagggacgcgagaagtggaccgcccagccccgggtcctcccgcactcc
ctgcgcggcgacgccgccaccctcccggatgccggcgccctcgactccaagggcctcaag
gccttcacggaacagatgcgcgaccaccagcacaccgaggaactgcgcctgggatacgtc
accttcacccggccccggaagctgctgctcggctccggccactggtggggccccacccag
aagcgcacccgcgggccgtccgacttcctgctggccctgcacgaccactgcctcgccgga
cacggggagaccgaggtgtgggccgagcgcccggacgccgccgcccagaacccggcactg
gccgagcccacggccgacctcgcctggccgctgccgctcgacgaagtcgccctcgaccgc
cgccgggccgccgccgccacggtccgcgcccacctcgacgccctggcctccggagccctc
gccacgagcgccatcgaagaacaggccgccccggatgcggccgtacccgcgcaccccgca
cccggagaaccggacggccctcccgaggatctggaaccgcagcccgaggacgaggagagc
cacgaggacggtgactgggagtcgtggaccaccgcccggccggccaccacgccaccgccc
gttgccgtcacggaagcggtcaccccggcgacgcctgccgcgacctactccgccgccacg
gaaggccccaccccggaggaggcccgcctcatccactcctgggaccaggacctggaggcg
ctcagcggcgagctgctgcgggcccgccaaggaacccgtgacgtggtgctgcccgcctcg
ctgaccgcctccgagctgatgaggctcgccgccgaccccgcggggttcgcggcggaactg
gcccggcccatgccccggcccccgcagcccgcagcccggcgcggcacccgcttccacgcc
tgggtcgagtcccgcttcgaagacgtccagctgccgatgctcgacccggaggagctgccc
ggccacgacgccgacatcgccgacgaacacgacctcgaagccctcaaggaagccttcgag
cagaccgagtacgcccatcgcaccccgctcggcgtcgaggtccccttccagctcaccctc
gccggacgcacggtccgcggccgcatggacgccgtctaccgcctcgaatcggacaccgcg
accggcaccggaccgcaaacgcccgtgtacgagatcgtggactggaaaaccagccacacc
cgcgacgccgacccgctccagctcgccatctaccgactcgcctgggccgagcaccaccgg
ctcccactcgaagcggtcaccgcggccttcgtctacatccgcaccggggagaccgtccgt
ccccgccacctccccggccggcgagagatcgagcacatcctcctcggcacgacgcccggc
ccgtccccggaacagccgcccgcaccccacggagcgccggagccggcgcagcggaccgga
gaaccaccggaccggtccgcggccgccgcccgatag
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