Streptomyces albidoflavus: XNR_2393
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Entry
XNR_2393 CDS
T02545
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XNR_2393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salb03019
]
XNR_2393
03110 Chaperones and folding catalysts [BR:
salb03110
]
XNR_2393
03029 Mitochondrial biogenesis [BR:
salb03029
]
XNR_2393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salb04147
]
XNR_2393
Enzymes [BR:
salb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XNR_2393
Messenger RNA biogenesis [BR:
salb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XNR_2393
Chaperones and folding catalysts [BR:
salb03110
]
Heat shock proteins
HSP60 / Chaperonin
XNR_2393
Mitochondrial biogenesis [BR:
salb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XNR_2393
Exosome [BR:
salb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XNR_2393
Exosomal proteins of other body fluids (saliva and urine)
XNR_2393
Exosomal proteins of breast cancer cells
XNR_2393
Exosomal proteins of colorectal cancer cells
XNR_2393
Exosomal proteins of bladder cancer cells
XNR_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGI88765
UniProt:
A0A2A2UKJ4
LinkDB
All DBs
Position
complement(2784831..2786453)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSSALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIVNSKIGNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGLDLLGRARKVVITKDETTIVDGAGDSDQVNGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SSVFEKLELEGDEATGAAAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLSVGHGLNAATG
EYVDMIAEGILDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAPGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggtctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcacccttggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaagacccgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctggcccaggcgctcgtccgc
gagggtctgcgcaacgtcgccgcgggtgccaacccgatggccctgaagcgcggcatcgag
aaggccgtcgaggccgtctcctccgccctgctggagcaggcgaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgccgacacccagatcggcgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcggatggaggcgtcgctcgacgacccgtacatcctcatc
gtcaactccaagatcggcaacgtgaaggacctgctcccgctgctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtggtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggtgacatcgccatcctcacgggcggcacggtcatctcc
gaggaggtcggcctcaagctggagaacgccggtctcgacctgctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgacggtgccggcgacagcgaccaggtc
aacggccgcgtcgcgcagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgtctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggctctgctccaggct
tcctcggtcttcgagaagctcgagctcgagggcgacgaggccaccggtgccgccgccgtc
aagctggccctggaggccccgctcaagcagatcgccgtcaacggtggcctggagggcggc
gtggtcgtggagaaggtgcgcaacctctccgtgggccacggcctgaacgccgcgaccggc
gagtacgtcgacatgatcgccgagggcatcctcgacccggccaaggtgacgcgttccgcg
ctccagaacgccgcgtcgatcgccgccctcttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgccgctgccccgggtggcatgcccggcggtgacatggacttc
tga
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