Streptomyces albidoflavus: XNR_3853
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Entry
XNR_3853 CDS
T02545
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03420
Nucleotide excision repair
salb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XNR_3853
03430 Mismatch repair
XNR_3853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salb03400
]
XNR_3853
Enzymes [BR:
salb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XNR_3853
DNA repair and recombination proteins [BR:
salb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XNR_3853
MMR (mismatch excision repair)
Other MMR factors
XNR_3853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AGI90188
LinkDB
All DBs
Position
4377665..4380187
Genome browser
AA seq
840 aa
AA seq
DB search
MSSLFDDSFLADLQSSAPSARLGDEPPPPPEEEAPEEIPADLFGGKFDAPADRDAYYRDG
APRPAVDPAALLDGLNDEQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLGERGVHPG
QILAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKHLGFTSSFSIYD
AADSKRLMALVCRDLDLDPKRYPPKSFTAKVSNLKNELVDPEDFAAQAADGFEKTLAQAY
TMYQSRLREANALDFDDIIMTTVHLLQAFPDVADHYRRRFRHVLVDEYQDTNHAQYSLVR
ELVGTPADRPVDVPEGAESDHDPLHPAPEPAELCVVGDADQSIYAFRGATIRNILQFEED
YPNATTILLERNYRSTQTILTAANAVIERNENRRPKNLWTDAGAGAGITGYVADTEHDEA
QFVAEEIDRLTDAGDAKAGDIAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVR
DVLAYLRVLANPEDSVSLRRILNTPKRGIGDRAEAMIDALSQRERVSFPQALRRVDEAYG
MAARSANAVKRFNTLMEELRTVVESGAGPATVLEAVMERTGYLAELQASTDPQDETRIEN
LQELAAVALEFEQDRSEEEGAGTLPEFLEQVALVADSDQIPDEDEDGSGVITLMTLHTAK
GLEFPVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQ
PSYNPPSRFLEEIPEQHLKWKRTGSMGAPAAASPRGPAGSVASSLSSSTRAKGAPAFATR
RAAEQPVVALAVGDRVTHDQFGLGTVVGVKGAGSAAEATVDFGGEKPKRLLLRYAPVEKL
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggccgacctccagtcctcggcgccctctgcc
cggctcggggacgagccgccgcccccgcccgaggaggaggcaccggaggagatccccgcc
gacctgtttggcgggaagttcgacgcgcccgcggaccgggacgcgtactaccgggacggc
gccccgcgtcccgccgtcgacccggccgccctgctcgacgggctcaacgacgagcagcgc
gccgccgtcgtccacagcgggtcgccgctgctcatcgtcgcgggcgccggttccggcaag
acccgcgtactcacccaccgcatcgcccacctgctcggcgagcgcggtgtgcacccgggc
cagatcctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgag
gagctggtcggcccgcgcgccaacgccatgtgggtctccaccttccacagcgcctgcgtg
cgcatcctgcgccgcgagtcgaagcacctcggcttcacctcgtcgttctcgatctacgac
gcggccgactccaagcggctaatggccctggtctgccgcgatctcgacctcgacccgaag
cggtacccgccgaagtccttcacggccaaggtctcgaacctcaagaacgagctggtcgac
ccggaggacttcgccgcccaggccgccgacggcttcgagaagacgctggcgcaggcctac
acgatgtaccagtcgcggctgcgcgaggccaacgcgctcgacttcgacgacatcatcatg
accacggtccacctgctccaggcgttccccgacgtcgccgaccactatcggcgccgcttc
cggcacgtcctggtcgacgagtaccaggacaccaaccacgcccagtactccctggtcagg
gagttggtcggcaccccggccgaccgcccggtggacgtccccgagggcgccgagtccgac
cacgacccgctccacccggcccccgagccggccgagctgtgcgtggtgggcgacgccgac
cagtcgatctacgccttccgcggcgccacgatccgcaacatcctccagttcgaggaggac
tacccgaacgccaccacgatcctcctggaacggaactaccgctccacccagacgatcctc
accgcggccaacgccgtcatcgagcggaacgagaaccgccgcccgaagaacctctggacc
gacgccggggcgggcgccggcatcaccgggtacgtcgcagacaccgagcacgacgaggct
cagttcgtcgccgaggagatcgaccggctgaccgacgcgggcgacgccaaggcgggcgac
atcgcggtcttctaccgcaccaacgcccagtcccgtgtcttcgaggagatcttcatccgg
gtcggcctgccctacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgc
gacgtcctcgcctacctgcgcgtcctcgccaacccggaggacagcgtctccctgcgccgc
atcctcaacacccccaagcgcggcatcggcgaccgcgccgaggcgatgatcgacgccctc
tcgcagcgcgaacgggtcagcttcccgcaggccctgcgccgcgtcgacgaggcgtacggc
atggcggcccggtcggccaacgccgtcaagcggttcaacacactgatggaggagctgcgc
acggtggtcgagtccggcgccgggcccgccaccgtcctggaggcggtcatggagcgcacc
ggctacctcgccgaactccaggcgtccaccgacccgcaggacgagacccgcatcgagaac
ctccaggaactggccgccgtggccctggagttcgagcaggaccgcagcgaggaggagggc
gcgggcacgctccccgagttcctggagcaggtcgccctggtcgccgactccgaccagatc
cccgacgaggacgaggacggctccggcgtcatcaccctgatgaccctgcacaccgccaag
ggcctggagttccccgtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatg
cgcgccctcggccagaccaaggagctggaggaggagcgccgcctcgcctacgtgggcatc
acccgcgcccgtgagcggctctacctcacccgcgccgccatgcgcagcgcctggggccag
ccctcgtacaacccgccctcccgcttcctggaggagatccccgagcagcacctgaagtgg
aagcggaccgggtccatgggcgccccggccgccgcgagcccgcgcggcccggccgggtcc
gtcgcctcctcgctctcctcctccacccgcgccaagggagccccggccttcgccacccgg
cgcgccgcggaacagccggtggtcgcgctggccgtcggcgaccgcgtcacccacgaccag
ttcggcctgggcacggtcgtcggcgtcaagggcgcgggctcggccgccgaggccaccgtc
gacttcggcggcgagaagcccaagcggctgctgctgcggtacgcgccggtcgagaagctg
tag
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