Streptomyces albidoflavus: XNR_4814
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Entry
XNR_4814 CDS
T02545
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03030
DNA replication
salb03430
Mismatch repair
salb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XNR_4814
03430 Mismatch repair
XNR_4814
03440 Homologous recombination
XNR_4814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salb03032
]
XNR_4814
03400 DNA repair and recombination proteins [BR:
salb03400
]
XNR_4814
Enzymes [BR:
salb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XNR_4814
DNA replication proteins [BR:
salb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XNR_4814
DNA repair and recombination proteins [BR:
salb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XNR_4814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Tsr1_G-like
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGI91136
UniProt:
D6AWR9
LinkDB
All DBs
Position
5477124..5480672
Genome browser
AA seq
1182 aa
AA seq
DB search
MSATSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSA
EKAGVTPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNL
FRLSSDAYSEGWLQKWPRMDKESISQWSEGLIASTGCPSGEVQTRLRLGQEEEALRAAAE
YQEIFGKDRYFLELMDHGIEIERRVRQGLLDIGKKLGIPPLVTNDSHYTYSHESVAHDAL
LCIQTGKNLSDPDRFRFDGTGYYLKSTEEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFE
KRDLMPKFDIPDGFTEVTWFQEEVRRGMARRFPAGVPEDRQRQAEYEMDVIIQMGFPGYF
LVVADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPD
VDIDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTK
AMPADVLGKGIDLDGITNPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVH
AAGVIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDARKM
VEANKGIDLDLLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVS
ALYRPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEILGLTYGLIVYQEQVQKAAQI
IAGYSLGEADILRRVMGKKKPEELAKNFVLFQEGAKKKGFSDEAIQALWDVLVPFAGYAF
NKAHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPDV
NESVHNFAAQSDDVILFGLEAVRNVGTNVVESIIRARKAKGKFSSFPDYLDKIEAQACNK
RTTESLIKAGAFDALGHTRKGLTAHYEPMIDNVVAVKRKEAEGQFDLFGGMGDDNADEPG
FGLDIEFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFGDG
AVVTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVK
GRLDKREDIPRLVAMELQVPDLSNAGTNAPVIITIPAVKVTPPMVSRLGEVLDSHRGNSE
VRIKLQGPRKTTVLRLDRHRVQPDPSLFGDLKVLLGASCLAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccacgtccaagccgcccttcacgcacctgcacgtccacacgcagtactccctg
ctggacggcgccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacc
cacatcgccatgtcggaccacggcaacctccacggcgcgtacgacttcttccacagcgct
gagaaggcaggggtcacgccgatcatcggcatcgaggcgtacgtggccccggagtcgcgg
cggaccaagcggaagatccagtggggccagccgcaccagaagcgcgacgacgtctcgggc
tccggcggttacacccacaagacgatctgggcggccaactccaccggcctgcacaacctc
ttccggctctcctccgacgcgtactccgagggctggctccagaagtggccccggatggac
aaggagtcgatctcgcagtggtcggaggggctgatcgcctccaccggctgcccctccggc
gaggtgcagacccggctgcggctgggccaggaggaggaggcgctgcgggccgccgccgag
taccaggagatcttcggcaaggaccggtacttcctggagctgatggaccatggcatcgag
atcgagcgccgggtccgccagggcctgctggacatcggcaagaagctcggcatccccccg
ttggtcaccaacgactcgcactacacctactcccacgagtcggtcgcccacgacgccctg
ctctgcatccagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcacg
ggctactacctgaagtcgacggaggagatgtacgccatcgactcctccgacgcctggcag
gaggggtgccgcaacacgctgctggtcgccgagcagatcgacaccaccggcatgttcgag
aagcgcgacctgatgccgaagttcgacatcccggacggcttcaccgaggtgacctggttc
caggaggaggtccgccgcggcatggcgcgccgcttcccggccggcgtccccgaggaccgc
cagcggcaggccgagtacgagatggacgtcatcatccagatggggttcccggggtacttc
ctcgtcgtcgccgacttcatcatgtgggcgaagaacaacggcatcgcggtcggccccggc
cgaggctccgcggccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccg
atcgagcacggcctgatcttcgagcgcttcctcaacccggagcgcgtctccatgcccgac
gtcgacatcgacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtcacggagaag
tacggcgccgacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgcc
atcaaggactcggcccgcgtcctcgggtacccgtacgcgatgggcgaccggctcaccaag
gcgatgcccgccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccgaag
cacccgcgctacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtg
aagaaggtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcac
gcggccggcgtgatcatgtccagcgagccgatcgtcgaccacgccccgctgtggacccgg
cacaccgacggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctg
ctgaagatggacttcctcggcctgcgcaacctcaccatcatggacgacgcgcggaagatg
gtggaggccaacaagggcatcgacctcgacctgctcgccctgccgctggacgacccgaag
accttcgaactcctctgccgcggtgacaccctgggcgtcttccagttcgacggcggaccc
atgcggtccctgctgcggctgatgaagcccgacaacttcgaggacatttccgccgtctcg
gccctgtaccggccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaag
aacggccagcaggagatcaccccgatccacccggagctggaggagcccctcaaggagatc
ctcggcctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatc
atcgccgggtactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaag
cccgaggagctggcgaagaacttcgtcctcttccaggagggcgcgaagaagaagggcttc
tccgacgaggcgatccaggcgctctgggacgtcctggtgcccttcgccggctacgccttc
aacaaggcgcactcctccgcgtacggcctggtcacctactggaccgcgtacctcaaggcc
aactacccggccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaag
tcggccgtctacctgaacgagtgccggcgcatgaagatcaaggtgctgccgccggacgtc
aacgagtcggtgcacaacttcgccgcccagagcgacgacgtgatcctcttcggcctcgaa
gcggtccgcaacgtcggcaccaacgtggtcgagtcgatcatccgcgcccgcaaggcgaag
gggaagttctcctccttccccgactacctcgacaagatcgaggcgcaggcgtgcaacaag
cggaccaccgagtcgctgatcaaggccggtgccttcgacgcgcttggccacacccgcaag
gggctcaccgcgcactacgagcccatgatcgacaacgtggtggcggtcaagcgcaaggag
gccgaggggcagttcgacctcttcggcggcatgggcgacgacaacgccgacgagccgggc
ttcggactcgacatcgagttcaccgacgaggagtgggacaagacctacctcctcgcccag
gagcgcgagatgctcggcctctacgtctccgaccacccgctcttcgggctggagcacgtc
ctctccgacaaggccgacgccgggatcgggcagctcaccggcggtgacttcggggacggc
gcggtcgtcacggtcggcggcatcatctccggtctccagcgcaagatgaccaagcagggc
aacgcctgggccatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttc
cccgccacctaccagctggtctccacgcaactcgtcgaggacgccgtcgtcttcgtcaag
gggcgcctggacaagcgggaggacatcccgcggctggtcgcgatggagctgcaggtcccc
gacctctccaacgcgggcaccaacgccccggtgatcatcaccatcccggcggtcaaggtg
accccgccgatggtcagccgcctcggcgaggtgctcgactcccaccgcggcaactccgag
gtgcggatcaagctccagggcccccgcaagaccacggtgctccggctcgatcggcaccgg
gtccagcccgatccctcgctcttcggcgacctgaaggtgctgctcggcgcctcctgcctg
gcgggctga
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