Homoserinimonas hongtaonis: C2138_00025
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Entry
C2138_00025 CDS
T05414
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
salc
Homoserinimonas hongtaonis
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salc03032
]
C2138_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_00025 (gyrB)
Enzymes [BR:
salc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C2138_00025 (gyrB)
DNA replication proteins [BR:
salc03032
]
Prokaryotic type
DNA Topoisomerases
C2138_00025 (gyrB)
DNA repair and recombination proteins [BR:
salc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C2138_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AWB88148
LinkDB
All DBs
Position
4943..6976
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AA seq
677 aa
AA seq
DB search
MSLQSPENPSEEQATTPASHQRTADEQKLDNESYGADQIQVLEGLEAVRKRPGMYIGSTG
PRGLHHLVYEIVDNSVDEALAGFCDTISVTIMADGGIKVIDNGRGIPVDIHPVEKKSTVE
VVLTILHAGGKFGGGGYAVSGGLHGVGSSVVNALSRRLSVEVRRQGHVWRQSFQNGVPDA
PLEKGEETTETGTTISFWPNDEIFESVVYDYETLRTRFQQMAFLNKGLTISLTDERVDEE
GNDGRKDTFMYERGLVDYVEYLNSAKKSEVVHPEIISIESEDTERRIALEVAMQWTTSYS
ESVHTYANTINTHEGGTHEEGFRAALTTLVNKYAREKGILKEKDDNLTGEDVREGLTAVI
SVKLGEPQFEGQTKTKLGNTEAKSFVQKVAGEALGDWFARNPQQAKDVIRKALQASAARM
AARKAREQTRRKGLLESGGMPGKLRDCASKDPSLSEIFIVEGDSAGGSAVQGRNPDTQAI
LPLRGKILNVEKARLDRALGNAEVQAMITAFGAGIGEDFDKDKARYHKIVLMADADVDGQ
HITTLLLTLVFRYMRPLIDLGYVYLAQPPLYKLKWSNSPHEYVYSDRERDQMLEIGLAGG
KRIPKDNGIQRYKGLGEMDYKELWETTMDPATRTLQQVTLDDAASADEIFSTLMGEDVEA
RRNFIQRNAKDVRFLDI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacagtcacccgagaatccatctgaagagcaagcgaccacaccggcatcgcac
cagcgcactgcggacgagcagaagctcgacaacgagagctatggtgccgatcagatccag
gttcttgagggtctggaagcggtgcgcaagcgccccggtatgtacatcggttcgacgggc
ccgcgtggtcttcaccatctcgtgtacgaaatcgtcgataactcggtggatgaggccctc
gcgggattctgcgacacgatctccgtgacgattatggccgacggcggcatcaaggttatc
gacaacggtcgaggaatccctgtcgacattcacccggtcgagaagaagtcgacggttgag
gtagtgctgacgatcctccacgccggtggcaagttcggcggcggtggatacgccgtttcg
ggtggtctacacggtgtcggcagctcggtcgtgaatgctctctcccgccgcctttccgtc
gaggttcgccgccagggacatgtgtggcgccagagctttcaaaatggtgtcccggatgcc
ccgctcgagaagggcgaggagacaacagagaccggcaccacgatcagcttctggccgaac
gatgagatcttcgaatccgttgtctacgactatgagaccctgcgcactcgctttcagcag
atggcgttcctcaacaagggactcacgatttcactcacggatgagcgggtcgacgaggaa
ggcaacgacggtcgcaaggacacgttcatgtatgagcgcgggcttgtcgactatgtcgag
tacctcaactccgccaagaagtccgaggttgtgcaccccgaaatcatctcgatcgagtcg
gaagacacggagcggcgcattgcgctcgaggttgcgatgcagtggaccacgtcatacagc
gaaagcgttcacacgtacgccaacaccatcaacacccacgagggcggcacgcacgaagag
ggcttccgtgccgcgctgacaaccctggtgaacaagtacgcccgcgaaaagggaatcctt
aaagaaaaggatgacaacctcacgggtgaggatgttcgcgagggcctgaccgcagtgatc
tccgtcaagctaggggagccgcagttcgagggccagaccaagaccaaactcggcaacacc
gaggcaaagtcgtttgtgcagaaggttgccggcgaggcgctcggcgactggttcgcccgc
aacccgcagcaggcaaaggacgtcatccgcaaggcgttgcaagcatccgcagctcgtatg
gcggctcgcaaggcgcgcgaacagactcgtcgcaagggcctgctcgaatccggcggaatg
cccggaaagctgcgtgactgcgcgagcaaggacccgagcctctctgagatcttcatcgtt
gagggtgactccgcaggtggttccgccgtgcaggggagaaaccccgacacccaggcgatt
ctgccgctgcgtggaaagatcctcaacgtagaaaaggcgcgcctcgatcgtgcgctcggc
aacgccgaggtccaggcaatgatcaccgccttcggcgctggcatcggtgaagacttcgac
aaggacaaggcccggtaccacaagatcgtgctcatggccgatgccgatgtcgacggccag
cacattacgacgcttctgctgactctcgtatttcgctacatgcggccgctcatcgatctc
ggctacgtgtaccttgcgcagccgcctctctacaagctcaagtggtcgaactcgcctcac
gagtacgtctactccgatcgcgaacgcgaccagatgctggagatcgggcttgccggcggc
aagcgcatccccaaggacaacggcatccagcgctacaagggtctcggcgagatggactac
aaggaactgtgggagacgaccatggatcctgcaacccgcacgctccagcaggtgaccctc
gatgacgcggcctcggccgacgagatcttcagcaccctcatgggagaagacgtcgaagca
cgccgcaacttcatccagcgcaacgcgaaggatgtgcgcttcctcgacatttga
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