Salinibacterium hongtaonis: C2138_03835
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Entry
C2138_03835 CDS
T05414
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
salc
Salinibacterium hongtaonis
Pathway
salc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2138_03835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_03835
Enzymes [BR:
salc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C2138_03835
DNA repair and recombination proteins [BR:
salc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2138_03835
Prokaryotic type
C2138_03835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
T6SS_Vgr
Motif
Other DBs
NCBI-ProteinID:
AWB88791
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All DBs
Position
780615..781253
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AA seq
212 aa
AA seq
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MDAGWAAALSPVAETITSLGEFLAGEEQYMPAQADVFRAFEHPFADVRVLIVGQDPYPTP
GHPIGLSFAVERHVRPLPRSLNNIYRELADDVGVTPPAHGDLTSWSKQGVMLLNRVLTVR
PGEPGSHRGRGWELVTDAAISALAGRGSPLVAMLWGTQARSLEPLLGATPIVSSAHPSPL
SASRGFFGSRPFSRANKLLSTQGADPIDWDIE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggctgggcggccgcgctttcccctgtcgctgagacgatcacgtcgctgggg
gagtttcttgcgggggaggagcagtatatgccggcgcaggctgacgtgtttcgcgcgttc
gagcatcctttcgccgatgtgcgggtgctcatcgtgggccaagatccgtatccgacgccg
gggcatcccatcgggctgtcgtttgccgtcgagcgccacgtgcgtccgctgccgagaagc
ctgaataacatctaccgcgagctggccgacgatgtgggggttacgccgcccgcccacgga
gacctcacgagctggagcaaacagggcgtcatgttgctcaacagggttctcacggtgcgg
ccgggggagccggggtcgcacagggggcgaggctgggaattggtcacggatgccgccatc
agcgcgcttgcaggtcgcgggtcacccctggtcgccatgctatggggtacccaggcgcgc
tcgctcgagccgcttctcggggcgacccccatcgtctcctccgcgcatccgagcccgctt
tctgcgtcgcggggcttcttcggctctcgcccctttagcagggcgaataagctcttatcg
acgcagggtgccgatcccatcgattgggacatcgaatga
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