Homoserinimonas hongtaonis: C2138_05420
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Entry
C2138_05420 CDS
T05414
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
salc
Homoserinimonas hongtaonis
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salc03032
]
C2138_05420
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_05420
Enzymes [BR:
salc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C2138_05420
DNA replication proteins [BR:
salc03032
]
Prokaryotic type
DNA Topoisomerases
C2138_05420
DNA repair and recombination proteins [BR:
salc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C2138_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2483
Motif
Other DBs
NCBI-ProteinID:
AWB89055
LinkDB
All DBs
Position
1107599..1108570
Genome browser
AA seq
323 aa
AA seq
DB search
MPRLRTTNPSHPGWTRRRRGTGYSLLNESGGAVTSPYERERVDALAIPPAWTDVWISPHR
NGHIQACGTDASGRRQYIYHEQWQRSRARAKYDRALELAERLPRARAQVTRDLRGEPGTR
DRALAVAFRLLDSAYLRVGSERYAQLHGSKGLTTLEGSDAHVSADTVVLEFVGKSAMDWS
SRTEDPDLAAAIRSLKTRGPHSRLLAWKDGNRWRALRPEEVNDYVRARTGGDFTAKDFRT
LHGTIIAARELAALGTQPKAAATKRAINEAVRATAHLLGNTPAVARSTYIDPRVIDRFRS
GALLRTGSVSPERAIRELLLGTP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctgagaaccacaaacccgtcgcacccggggtggacccgccgtcggcgcggc
acaggatattcattgctcaacgagagcggcggggccgtgacgagcccctatgagcgggag
cgcgtcgatgctctcgctatcccaccagcctggaccgatgtgtggatttcgccccatcgc
aacggccacatccaagcgtgcggaacagacgccagtgggcgccgacagtacatctatcac
gagcagtggcagcgatcgcgtgcgcgcgcgaaatacgacagagcgcttgagttggcagag
agattgccccgcgctcgcgcccaggtgacccgcgatctccgtggcgagccaggcacgcgc
gaccgcgctctggcggtggcgtttcgtctcttggatagtgcttatctgcgagtgggcagc
gaacgttacgcacagctccatggcagcaagggcctcaccaccctcgagggctcagacgcc
catgtgtcggcagacaccgtggtgctggagtttgtgggcaagtcggcgatggactggtcg
tcgcgcacggaggacccagatctggccgccgcaatccgctcgctcaaaactcgaggccct
cattccaggctgctcgcgtggaaggacggcaacagatggcgggcgcttcggccagaggag
gttaacgactatgtgcgggcgcgcacgggcggtgacttcacggctaaggacttccgcacg
cttcacggcacgatcattgcggcgagggagcttgccgcgttgggcacgcaaccgaaggcg
gcagccacaaagcgggcgatcaacgaggcggttcgggcaactgcgcacctgctgggcaac
accccggccgttgctcggtccacctatatcgaccctcgcgtgatcgaccgatttcgcagc
ggagccctgctgcgcactggctcggtttctcccgagcgcgccattcgcgagctcctgctg
ggcaccccttga
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