Homoserinimonas hongtaonis: C2138_07090
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Entry
C2138_07090 CDS
T05414
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
salc
Homoserinimonas hongtaonis
Pathway
salc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C2138_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salc03021
]
C2138_07090
Transcription machinery [BR:
salc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2138_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Pox_Ag35
Motif
Other DBs
NCBI-ProteinID:
AWB89334
LinkDB
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Position
complement(1463622..1464881)
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AA seq
419 aa
AA seq
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MKGNLMATRKTTAEAATTDPEVEVAEAPAKKAPAKAAAKKAPAKTAAKTAAKSPRAKKAA
APEVDEEPEVDADAEHGDESDTEDTSKDEKLPTGAIVLSMADEDDEVPVYSAAITGATAD
PVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAEDKLANEGEKLSPTQRRELQWVAKDGQ
RAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATW
WIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEK
VVEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQKQLESLLDSLSE
REAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaacctcatggctacccgcaagacgactgctgaagccgcaacgactgaccct
gaggtcgaggtcgccgaggcgcccgctaaaaaggctccggccaaggctgccgccaagaag
gcacccgccaagaccgcggcgaagaccgctgccaagtcccctcgcgccaagaaggctgcg
gcacctgaggttgacgaagagcccgaggtcgacgccgacgccgaacacggcgacgagagc
gacaccgaggacacctcgaaggacgaaaagctgcctaccggtgcgatcgttctgtcgatg
gctgacgaggacgacgaagtccccgtgtactcagccgccattacgggcgcaaccgctgac
cctgtcaaggattacctgaagcagattggaaaggtcgccctcctcaacgcagctgaagag
gtggagcttgccatgcgcatcgaggcaggtctctttgccgaggacaagctcgcgaacgag
ggcgagaagctctctccgacgcagcggcgcgaactccagtgggtcgccaaggacgggcag
cgcgctaagagccacctgctcggcgctaacctccgactcgtagtctcgcttgcaaagcgg
tacacgggccgtggcatgcagtttcttgacctcattcaagagggcaacctgggcctgatc
cgtgcagtcgagaagttcgactacacgaagggcttcaagttctcgacctatgcgacctgg
tggatccgtcaggccatcactcgcgccatggccgaccaggcccgcacgattcgcattccc
gtgcacatggtcgaggtcatcaacaagcttgcccgggtgcagcgtcagatgcttcaggac
cttggccgcgagccaacgccggaggagctgagccgcgaactcgacatgaccccagaaaag
gtcgtcgaggttcagaagtatggtcgcgagcccatctctctgcacacaccgctcggtgaa
gatggcgacagcgaattcggtgaccttatcgaggacaccgaagccgtggttcccgccgac
gccgtgggcttcacaatgcttcagaagcagctcgaaagcctgcttgactccctctccgag
cgcgaagcaggagttattcgtatgcgcttcggcctaggcgacggtatgcctaagactctg
gaccagatcggtgacacgttcggcgttacgcgtgagcgcatccgccagatcgagtcgaag
acgatggccaagcttcgccacccgtcgcggtcgcagtcgctgcgggattaccttgagtaa
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