Salinibacterium hongtaonis: C2138_07570
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Entry
C2138_07570 CDS
T05414
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
salc
Salinibacterium hongtaonis
Pathway
salc03030
DNA replication
salc03430
Mismatch repair
salc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2138_07570 (holA)
03430 Mismatch repair
C2138_07570 (holA)
03440 Homologous recombination
C2138_07570 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salc03032
]
C2138_07570 (holA)
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_07570 (holA)
Enzymes [BR:
salc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2138_07570 (holA)
DNA replication proteins [BR:
salc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2138_07570 (holA)
DNA repair and recombination proteins [BR:
salc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2138_07570 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AWB89414
LinkDB
All DBs
Position
complement(1567892..1568932)
Genome browser
AA seq
346 aa
AA seq
DB search
MAGRPAGKSASKAPAKASAKVTIPQLPWSQARPAPVVLVSGTEGFLADRAIRALRDELKR
NDPSLEVSDLEADGYSPGQLLTVASPSLFGEPRMIRVINVEKCTDAFITETLGYLESPAD
DTCLVLRHGGGVRGKKLLDAIRGGLGGGVEVVCTELKKEQDKVDFASAEFKKAGRRATPG
AVRALVAAFSDDIAELASACQQLIADAAAEITEVTVENYYSGRVETSAFKVADVAIAGRQ
GEALVMLRHALASGADPVPIVAAFAMKIRTMAKVSGSRANASQLGLAPWQVDRARRDLQG
WSDEGLGRCIETLAETDAAVKGAQRDPVFALERMVSVIASRGERRG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggcaggccagcaggcaaatcggcgtccaaggcgccggcgaaggcatcggccaaa
gtcacgattccgcagctcccgtggtcgcaggctaggccagcgcccgtggttctcgtatca
ggcacagagggcttcctcgccgatcgtgcgatccgagccctccgcgacgaactcaagcgc
aacgacccgagccttgaggtcagcgacctcgaggccgacggttattctccggggcagcta
ctcacggtggcgagcccatccctttttggtgagcctcgcatgatccgggtcatcaatgtc
gagaagtgcacggacgcattcatcaccgagacgctgggatatctagagtctccggccgac
gacacctgcctcgtgctgcgccacggtggtggcgtccggggcaagaagcttcttgacgct
atccggggcggcctcggtggcggggttgaggtcgtgtgcacggagctcaaaaaggagcaa
gacaaggtcgacttcgcctcggccgagttcaaaaaggctggtcgccgagcgactcccggc
gccgtccgcgcgctcgtggcggcgttctcggacgacatcgccgagctcgcttcggcctgc
cagcaactcatcgcggatgccgcagccgaaatcaccgaggtcacggtcgagaactactac
tcgggccgagttgagacctcggccttcaaggtggcagacgttgcgatcgccgggcgtcag
ggcgaagcgctcgtgatgctgcggcacgcgctggcctcgggggcagatcccgttcccatc
gtcgctgccttcgctatgaagattcgaaccatggccaaagtctccggttcccgggccaac
gcctctcagctggggcttgccccgtggcaggtcgaccgagcacggcgcgaccttcagggc
tggagcgacgaaggcctaggccggtgcatcgagactctcgcggagacggatgcggcggtc
aagggtgcccagcgcgatcccgtcttcgcccttgagcgcatggtcagcgttatcgcctcc
cgcggggagcgccggggctag
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