Salinibacterium hongtaonis: C2138_08350
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Entry
C2138_08350 CDS
T05414
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
salc
Salinibacterium hongtaonis
Pathway
salc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C2138_08350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_08350
DNA repair and recombination proteins [BR:
salc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C2138_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AWB90633
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All DBs
Position
complement(1735685..1736629)
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AA seq
314 aa
AA seq
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MRAIWKGAIAFGLVNVPVKVYAATEDHDIPLHQVHAADGGRIRYQRRCEICGEVVDYADI
DKAFDDGEQTVVLNDEDFAALPVEKSREIDVVEFVPTEQIDPIMFERTYFLEPDSSSTKA
YALLRRTLEQTERTAIVQFALRQKSRLGALRVRGDVLILQSLLWDDEVRTATFPSLDKPV
RISPKELEMSAALVESFESDFDPSKFTDEYQAQLRELIDAKLKEGDAFDSEATFGKRGEG
EGGEVIDLMEALRRSVERSRSGGAGGAKSGSKAGPKNSAKNGGKGSAKGSAKGSAKGSAK
GSAPKKEKKVARSS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatttggaagggtgcgatcgccttcgggctcgttaacgtgcccgtcaaggta
tatgcggcaaccgaagaccacgacatcccgttgcaccaggtgcacgcggccgatggcggg
cggattcggtatcagcgccggtgcgagatctgtggcgaggtcgtggactatgccgatatc
gataaggcgttcgacgacggcgagcagacggtcgtgctgaacgacgaggactttgccgcg
cttcccgtggagaaaagcagggagattgacgtcgtcgagtttgtgccgaccgaacagatt
gacccgatcatgtttgagcgcacctattttcttgagccggattcgtcgtcaaccaaggcg
tatgccctgcttcgccgcaccctggagcaaactgagcgcaccgcgatcgtgcagttcgcg
cttcggcaaaagagcaggctcggggctctgcgagtgcgcggcgatgtgctcatcctccag
tcgctgctgtgggacgacgaagttcgcacggcgacgttcccatccctggataagcctgtt
cgaatctcgcccaaggagctcgaaatgtcggctgcgttggtggagtcattcgagtccgat
tttgacccgtccaagttcactgacgagtatcaggcccagctccgcgagctgatcgacgcc
aagctcaaggagggtgacgcgttcgattcggaggccaccttcggcaagcggggcgaggga
gaaggcggggaggtcatcgacctcatggaggcgctccgccgaagcgttgaacgcagcaga
tccggcggggcaggtggagcaaagagcggctccaaagctggccccaagaacagtgccaag
aacggcggaaagggcagcgccaagggcagcgcaaaggggtccgcaaaggggtccgcaaag
gggtctgcgccgaagaaggaaaagaaggtggctcgatcgtcctag
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