Homoserinimonas hongtaonis: C2138_09005
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Entry
C2138_09005 CDS
T05414
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
salc
Homoserinimonas hongtaonis
Pathway
salc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C2138_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Y_Y_Y
Ig_J
Pur_ac_phosph_N
K319L-like_PKD
PKD
Ig_VWA7
Motif
Other DBs
NCBI-ProteinID:
AWB89662
LinkDB
All DBs
Position
complement(1873976..1879585)
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AA seq
1869 aa
AA seq
DB search
MGDVIFTLSALRPQSRKTIASVLVMAVVAGVPLTIAALHPGFPVSDVDLTSRDVWVTNGE
QLLGGRLNRQIDELNGSVVASSADFDVLQDGDTLFMHDPTSGRVESVNPATTEVTSAIEV
PKGSEIAFGGDLLSILSPEGELWAIPAVGDLQFNYVSQPPIATLGEGAHVAVSRDGVVLA
VSGKKGKLYRLESLADLPVESGFPKVGEFQIAAVGDRAVVFDQTTNELVTEDGKVYPLGD
EPGLRLQQTSPESDRAIVATGESLLSVNLGSGAVDVLSADIDSAVTDPAQVAAPVSLDGC
AHGAWAGAQKYVLACDGQEPAPVDIEQPTRGSALEFRVNRTVIALNNLDNGNVWLVDENM
RLVENWEDVTPPEEQETEEVGDEKSAIQSFEDTLAERTETNRPPTANDDDFGIRPARTTI
LSLLDNDTDPDGDVLVISAFDAISETTGRIDTIDGGRALQFTPAAGFVGSVTLNYTVDDG
REGSDSARVTARVVPDESNALPIPVRIGGISVEANQTVSYNVLADWKDPDGDDIFLIGAS
PKSGDLVRFTPDGFVTFTHQTSELGEKEVAFQVTDGRGEAVTGTLVVTVEPAGSLNPIGT
PDFAETFVDEMVVVEPLLNDISPSGAQLALIGIEEPGGSTSASFSSDTGTLSFSSSKPGI
NYVKYTLTAGATSSVGIVRINVLEKPDDASLPPVAVKDIAYLRGDEPTTVSVLSNDVSPS
GRVLAVQSVDVPAEYKAKGLVVELLASTSVRVTSPAALTAQASFTYTISDGVSTASAGVS
VVPVPALTKHQPPVAQNDAARVRVGDIVTVDVLDNDFHPDDSSMFLDEKLITEPAEGIAF
VSRDTVRYQAPREPGEYRLDYRVLDPFGETAAATVVFTVVAEDEANNQSPIPVPLVARVL
AGNAIRVDVPLNGIDPDGDSTQLLNFPISPQLGTVGEVGPGYFYYEASSAAAGTDVFSYE
VYDAFGATGVGEIKIAVIPEPDELQEPSAVPDSVSIRPGRLAQVDLMANDSDPQGAPIKV
SETLVDVPEGIDAEVIDKRFLVVKAPDDVQSFTIRYELSNDRGGSVMSYVLVQVTEDAPL
LPPTAEDVQILTKDIAGEETFTVDVLDGYAFNPSGPNSDLVVSIEGPNKSSAQLLERNGQ
IEVTPGKKRQAVAYRVTNEADELSALAFILIPAAVDEDFDDPPYIDPNLPIQYVSMNESG
EWDLSGIVKVPSGRAAWIADETSVTAIQSNGESPFVDKDTLRFTPVRDYRGPASINFTVT
DGSSKNDPKGNTANLTLPIIVGDPEFRDTPPEFTTPNTQVEVGETTMVDLRASTGHPNPR
ILQEVTYSNITGQASGLQANLSGSELTLTVPRNTPKGTTVTLGVTLRWDDFEVPGTINVT
VVGSSKPLAVAVTDVHEMKRGGGDGGGSITVNPLTNDSNPYQTTGEPLTIVEATVSNSGE
PATVTHSGTSVKITPSPSLKSGVVEVIYTIEDATEDNDRRVNGTITLTVSDVPDAVGKPT
VPTQGDEGAVTIGFAAPASNGKPITSYEVTSSPGSSTPTTCAPPSCTITGLTNGTAYTFS
VRAINQHGPGAWSTPSNAVIPYGTPGTPTVTMSVSDQWAPGGSLSASWGSVNPNGGSVTY
TWQLVNGGDVAQSGTTQGTTTGTLSNLPAGSHTVRVFATNTGQKSGGTGTSPVGSITTQG
VAPAPGGLGARVSDGEAPGSITWHWNAVSASPGGQASLSYEVSLNNGGWVGVGTRTEYSQ
SRLSEGNYDLRVRAVNKSGAGAVAGPVRGRIEAPPPPPEPDPPKVVLRKGGAIGCQSSGG
SSGCHKFDITLENFGGGGHTVEFFCNGSNMGYRTSFSGNHFAPSSPHCGFPNTYVEVDGR
KSNVVDFRP
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtcattttcacgctctccgctctgcgaccgcaaagtcgcaagacaatagcc
tccgttctggtgatggcagtcgttgccggcgttcctctcacgatcgccgccctgcatccc
gggttcccggtatcggatgttgacctcacctcgcgagacgtctgggtcaccaacggcgaa
cagcttttgggtggcaggctcaaccggcagatcgatgagctgaacggctccgtcgtggcc
tctagcgccgacttcgatgtgttgcaggatggcgacaccctgttcatgcacgacccgacg
agcggccgggtggagtcggtcaacccggcaaccacggaggtcacgtcggcgatcgaggtg
cccaagggctccgaaatcgcgttcggcggcgacctgctctcgatcctctcgcccgagggc
gagctgtgggcaatccccgccgtgggcgacctgcagttcaactacgtttcgcagccgccc
atcgccacgctcggcgagggcgcgcatgttgccgtcagccgggacggcgtcgtgctcgcc
gtctctggcaagaagggcaagctctaccggctggaatctctcgcagacctgccggtcgag
agcgggttccccaaggtgggcgagttccagatcgccgcggtgggcgatcgggcggtcgtg
ttcgaccagacgacgaacgagctggtcaccgaggatggcaaggtttacccgctgggcgac
gagccagggctccgccttcagcagacgagcccggaatccgatcgagcgatagtggcaacg
ggcgagtccttgctgtcggtcaacctcggttctggtgctgtcgacgtgctgtcggccgat
atcgacagcgccgtgaccgaccccgcgcaggttgctgctcccgtatcccttgacggatgc
gcgcacggtgcctgggccggggcgcagaagtatgttctcgcctgcgacgggcaggaacca
gctccggtcgacatcgagcagcccacccgcggcagtgcgcttgagttccgggtcaaccgc
acggtaatcgcgctcaataacctcgacaacggaaacgtgtggctcgtcgacgagaacatg
cgtctcgtggagaactgggaagacgtcaccccgccggaggagcaggagacggaggaggtc
ggcgacgagaagtcggcgatccaatcgttcgaagacaccctcgcggagcgcaccgagacc
aaccgaccgcccaccgccaatgacgacgacttcggcatccgcccggcacgcaccacaatt
ctctcgctgctcgataacgacaccgaccccgacggcgatgttctggtgatctcggcattc
gatgccatctctgagacgacggggcgcatcgacacgatcgatggcgggcgtgcccttcag
ttcacccctgcggctggcttcgtgggcagcgtgaccctcaactacacggtcgacgacggc
cgggagggaagcgatagcgcccgagtcacggcgcgcgtcgtgccggatgagtcgaacgcc
ctgccgatccccgttcgcatcggcggaatcagtgttgaggcaaaccagaccgtgagctac
aacgttctggccgactggaaagaccccgacggggacgacatcttcttgatcggggcgtcg
ccgaagtccggcgacctcgtgcgattcacaccagacggtttcgtgaccttcacccaccag
acctccgagttgggggagaaggaggtggccttccaggtcaccgacgggcgtggcgaagcc
gtcactgggaccctcgtcgtcacggtcgaaccggccggatcgctcaaccccatcggcacc
cccgactttgcggaaacgttcgtggacgagatggtggtcgtcgagccgctgctgaacgac
atctcgccctccggcgcccagctcgccctcatcggaatcgaggagccgggcggatccacc
agcgctagcttctcgtcggataccggcacgctctcgttctcttcgtccaagcccggcatc
aactacgtgaagtacaccctcaccgcaggggccacctcgagcgtaggaatagtgcgcatc
aacgtgctggagaagcccgacgacgcatccttgccccccgtggccgtcaaggacatcgcc
tatctccggggtgacgagccgacgaccgtctccgtgctgagcaacgacgtttcgccgtct
ggccgcgtactcgccgtgcagagcgtcgatgttcctgccgaatacaaggcaaagggcctg
gtcgtcgagcttttggcctccacgagtgtgagagtcacctcacctgcggccctcacggcg
caggcctccttcacttacacgatctccgatggcgtatccacggcgtcggcgggcgtctcc
gtcgtgcccgtgcctgccctcaccaaacaccagccgcccgtggcccagaacgacgccgcg
cgcgtgcgggtgggcgacatcgtcacggtcgatgtgctcgacaacgactttcatccggat
gactcctcgatgttcctggacgagaagctcatcacagagcccgcagaaggaatcgcgttc
gtgagccgcgacaccgtgcgctatcaggcgccgcgggagccgggcgaataccgcctcgac
tatcgagtgctcgatcccttcggcgagaccgccgcagccaccgtcgtcttcaccgtcgtc
gcagaggatgaggccaacaaccagagtcccatcccggtgccgctggtcgcccgagttctc
gccggcaatgccatccgggtcgacgtgccactgaacggcatcgaccccgacggcgactca
acccagctgctcaactttcccatcagccctcagctcggcaccgtgggagaggtcggcccc
ggctacttctactacgaagcatcctcggcagcggcgggcaccgacgtctttagctatgag
gtctacgacgccttcggcgctaccggagtcggcgagatcaagattgccgtgatccccgag
ccggacgaactgcaggagccgagcgctgttcccgacagcgtctcgattcgcccgggccgc
ctggcgcaggtcgacctcatggcgaacgattcagacccgcagggcgcgcccatcaaggtt
tcggagacgctcgtcgatgtgccagagggcatcgacgctgaggtcatcgacaagcgattc
ctcgtggtgaaggcgccagacgatgtgcagtcgttcactattcgctatgagctcagcaac
gaccgcggcggctcggtgatgagctatgtgctcgtgcaggtcaccgaggatgcgcccctt
ttgccgccgacggcagaagacgtgcagattctcaccaaggacatcgccggcgaagagacc
ttcacggtggacgtgctcgatggttatgcgttcaacccgtcggggccgaactccgacctc
gtcgtgagcatcgaaggccccaacaagtcctcggcgcagctactcgagcgaaacggccag
atcgaggtgacgcccggcaagaagcgccaggcggtggcctaccgcgtgaccaacgaggcc
gatgagctgagcgcgctcgcgttcatcctcatccccgctgcggtcgacgaagacttcgat
gacccgccctacatcgaccccaatctgcccattcagtacgtctccatgaacgaatcgggc
gagtgggatctctcggggatcgtcaaggtgccctccggccgggcggcctggatcgccgac
gagacctcggtcaccgcaatccagtcgaacggcgagtcgccttttgtcgacaaagacacc
ctgcggtttacgcccgttcgcgactaccgcggaccggcatccatcaacttcacggtgacg
gacggctcgtctaagaacgaccccaagggcaacaccgccaatctgaccctgccgatcatc
gtgggcgacccagagttccgcgacaccccaccggagttcacaacgcccaacacgcaggtt
gaggtgggggagaccacgatggtcgacctgcgcgcctcgacggggcaccccaacccccgg
attctgcaagaggtgacgtattccaacatcaccggccaggcatccggattgcaggcgaac
ctctcgggcagcgaactcaccctcacggtgccgagaaacacaccaaagggcacgacggtc
acgttgggcgtcacgcttcgatgggatgacttcgaggttcccggcacgatcaacgtgacg
gtggtcggttcgagcaagccgctcgccgtggccgtgaccgatgtgcacgagatgaagcgg
ggcggtggtgacggcggaggatccatcacggtcaatccgctcacgaacgactcgaacccc
taccagaccacgggcgagccgctcacaatcgttgaggccacggtctccaactccggcgag
ccggccacggtgactcactccgggacctcggtcaagatcaccccgtcgccctcgctcaag
agcggcgttgtcgaggtcatctacacgatcgaagacgccacagaagacaacgatcgccgc
gtcaacggaacgattaccctcaccgtgagcgatgttccggatgccgtgggcaagccgacg
gtgccgacgcagggtgacgaaggcgccgtgacgattggcttcgccgctcccgcctcgaac
ggaaagccgatcacaagctacgaggtcacctcgagccccggatcctcaacgccgaccacc
tgcgccccgccctcctgcaccatcacgggcctcactaacggcaccgcctacacgttctcc
gtgcgggccatcaaccagcacggccccggcgcatggtcgacaccgagtaacgctgttatt
ccctacggcacccccggaacgcccacggtgacgatgtcggtctcggaccagtgggcgccc
ggtggttccctctccgccagctggggcagtgtcaaccccaacggaggttcggtgacgtac
acgtggcagctcgtcaacggcggcgatgtcgcgcagtcgggcaccacccagggcacgacg
accggcacactgagcaatttgccagcgggtagccacaccgtgagggtgttcgcgacgaac
accggccagaagtccggcggcactggaacctcgccggtgggaagcatcaccacgcagggt
gtggcgccagctcccggcggcttgggtgctcgggtctccgacggcgaagcgccagggagc
atcacctggcactggaacgccgtgagcgcgagccccggcggtcaggcaagcctgtcctac
gaggtgagcctcaacaacggtggttgggttggggtcggtaccaggaccgagtactcgcag
agccggctctcggagggcaactacgacctccgcgtccgtgcggtaaacaagtcaggagcg
ggggccgtcgcgggccccgtgcggggccgcatcgaagcccccccgcccccgccggaaccc
gacccgccgaaggtcgtgctccgcaagggcggggcgattggctgtcagagcagcggcggc
agctcagggtgccacaaattcgacatcaccctggagaacttcgggggcggtggccacaca
gtggaattcttctgcaacggctcgaacatgggctaccgaacgtcgttctccggcaaccat
ttcgcgccgtcgtctccgcactgtggcttcccgaacacctacgtggaagtcgatggcagg
aagagcaacgtagtggacttcagaccgtga
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