Homoserinimonas hongtaonis: C2138_12565
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Entry
C2138_12565 CDS
T05414
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
salc
Homoserinimonas hongtaonis
Pathway
salc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2138_12565 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salc03400
]
C2138_12565 (xth)
Enzymes [BR:
salc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C2138_12565 (xth)
DNA repair and recombination proteins [BR:
salc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C2138_12565 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWB90268
LinkDB
All DBs
Position
2626382..2627218
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AA seq
278 aa
AA seq
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MRVATWNVNSIRTRYGRVVDWLVREDIDVLGMQEIKCKPEQFPLEAFEEAGYEVVAHGLN
QWNGVAFASRLPLEDVETSFELQPGFLKGAEGPDQPLEARALGATVDGVRLWSLYVPNGR
AIDDPHYVYKLDWLTRLRTASDNWMKENPGSPLALMGDFNVAPTDADMGDPSFVPGLSTH
ISQPERDAFAAFETIGMTDVVRPIVPEGFTFWDYKQLRFPRNEGMRIDFILGNPEFADLV
TDASIHRNERKGDAPSDHVPVVVDLAIEGDDDDRPMIF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgccacctggaatgtgaactcgatccgaacccgctacgggagggtggtcgat
tggctcgtgcgcgaagacatcgatgtgctcggcatgcaggagatcaaatgcaagccagag
cagtttcccctcgaagccttcgaggaggccggctatgaggtcgtcgcccacggcctcaac
cagtggaacggtgtcgccttcgcaagccgcctgccgctggaggatgtcgaaacgtcgttt
gagctccagcccggattcctcaagggcgccgaggggcccgaccagcccctcgaggctcgc
gcgctcggcgcgaccgtcgacggcgttcgcctgtggagcctgtacgtgcccaacggccgc
gccattgacgacccccactacgtgtacaagctggactggctcacccggcttcgcacggca
tccgacaactggatgaaagagaaccccgggtcaccgctcgctctgatgggcgacttcaac
gtcgctccgaccgatgcggatatgggcgacccgtcctttgttcctgggctctcgacccac
atctctcagccggagcgcgacgctttcgcggccttcgagacgattgggatgaccgatgtc
gtgcggccgatcgtgccggagggcttcactttctgggactacaagcagctgcgattcccc
cgcaacgagggcatgcgcatcgacttcatcctgggcaaccccgagttcgccgatcttgtg
accgacgcctcgattcaccgcaacgagcgcaagggcgacgcgcccagcgaccatgttccc
gtcgtcgtcgaccttgccatcgagggcgatgatgacgatcgtccgatgatcttctag
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