Salinibacterium sp. dk2585: FVA74_04810
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Entry
FVA74_04810 CDS
T06151
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sald
Salinibacterium sp. dk2585
Pathway
sald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVA74_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sald03019
]
FVA74_04810
03400 DNA repair and recombination proteins [BR:
sald03400
]
FVA74_04810
Enzymes [BR:
sald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FVA74_04810
Messenger RNA biogenesis [BR:
sald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FVA74_04810
DNA repair and recombination proteins [BR:
sald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FVA74_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF3553
TrmB
AAA_30
HTH_Crp_2
ResIII
HEM4
Cas3-like_C_2
MarR
GntR
HTH_20
HTH_11
MarR_2
PglZ_C
Fe_dep_repress
HTH_24
HTH_41
Motif
Other DBs
NCBI-ProteinID:
QEE60974
LinkDB
All DBs
Position
1022818..1024464
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AA seq
548 aa
AA seq
DB search
MTPQASDIRQRIETAARECFGWESVQAGQRRAVEALAEGRDVLAVMATGYGKSAIYQLAT
IIRGGLTVVVSPLIALQADQVEGLRDAPDAPPAAAVNSRAGARRLAAAWELAEGSGPRIL
LLAPEQLASEETLARLAAAGVDLVVVDEAHCVSSWGHNFRPDYLRLGAAVEQLGRPPVAA
LTATAPSPVQAEISERLRMRDPLVLVRGFDRANLSLDVDRHTSPEEKKRAVIDGITGERG
TGLLYVATRRETEEYAHALQERGLRAFAYHGAMSASARSEVHAAFHDGTADVVVATSAFG
MGIDKADVRFVVHASPPDSLDAYYQEAGRAGRDDEPARVRLHYRSEDLGLRRFFASSSPR
GETVAGVYRAVLHASGTAKPKELAESAEVSSRTVTSVLNLLSDAGVVRWGRRGVRIVDRV
SPEAAADRAAAAAEERERIDESRIEMMRGYAETSGCRRAFLLGYFGEEAPERCGNCDRCA
SGDTTNAPASHPTGDEAFSPNTSVVHPEFGAGTVMSTEDDRITVFFEHEGYKTLSRQAVE
ARGLLKAG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgacacctcaggccagcgacatccgacagcgaatcgagacggccgcacgggagtgtttc
ggttgggagagcgtgcaggccggccagcgccgcgcggtcgaagctctcgccgagggacgt
gatgtgctggcggtcatggcgacgggctacggcaagtcggccatctaccagctcgcgacg
atcatccgaggcggcctgacggtggtcgtgtcgccgctgatcgcgctgcaggcagaccag
gtggaggggctgcgggatgcgcccgacgccccgcccgccgctgcggtcaactcgcgtgcg
ggagcacggcgccttgccgcggcgtgggagctcgcggagggttctggcccccggatcctc
ctgctcgcccccgagcagctcgcctcggaggagacgctcgcgaggctcgctgccgccggg
gtcgacctcgtcgtcgtcgacgaggcccactgcgtctcatcctgggggcacaatttccgg
cccgactacctgcgcctgggtgccgcggtcgagcagctcggccgccctccggtcgccgcg
ctgacggcgaccgcgccgagtcccgtgcaggcggagatcagcgagcgactgaggatgcgc
gacccgctcgtgctcgtgcggggcttcgatcgggcaaacctctccctcgacgtcgaccgc
catacgagtcccgaggagaagaaacgagcggtgatcgacggcatcacgggggaacgcggc
accggcctgctctacgttgcgacccgccgtgagaccgaggagtacgcgcacgccttgcag
gaacgcgggctgcgcgccttcgcgtatcacggcgccatgagcgcctccgcccgcagcgaa
gtccacgccgccttccacgacggcactgcggatgttgtcgtcgcgacctcggcgttcggc
atggggatcgacaaggctgacgtgcggttcgtcgtgcacgcctcgccgcccgactcactg
gatgcctactaccaggaggcggggcgcgctgggagggacgacgagcccgcacgggtccgg
ctgcactaccgcagcgaggacctcggcctccggcgattcttcgcctccagctcgccgcgc
ggcgagacggttgcaggcgtctatcgcgctgtcctgcacgcatccggcacggcgaagccg
aaggagctcgcggagtccgccgaggtttcatcgcgcaccgtgacctcggtgctcaacctg
ctctccgatgcgggggtcgtgcgctggggtcgcaggggtgtgcgcatcgtcgaccgtgtc
agccccgaggcggcggccgaccgggctgcagccgcggccgaggagcgcgagcgcatcgat
gagtcccgcatcgagatgatgcgcggctatgccgagacgagcggatgccggcgcgccttc
ctcctcggatacttcggcgaggaggctcccgagcgctgcggcaactgcgaccgctgcgcg
agcggcgacacgacgaatgccccggcgtcgcacccgacgggcgacgaggccttctctccc
aacacgagcgtcgtgcacccagaattcggcgccggcaccgtcatgagcacggaggacgac
cgcatcacggtcttcttcgaacacgagggctacaagacgctctcgcgccaggcggtcgag
gcacgcggcctcctcaaggccggctga
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