Salinibacterium sp. dk2585: FVA74_05275
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Entry
FVA74_05275 CDS
T06151
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sald
Salinibacterium sp. dk2585
Pathway
sald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVA74_05275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sald03019
]
FVA74_05275
03009 Ribosome biogenesis [BR:
sald03009
]
FVA74_05275
Enzymes [BR:
sald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FVA74_05275
Messenger RNA biogenesis [BR:
sald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FVA74_05275
Ribosome biogenesis [BR:
sald03009
]
Prokaryotic type
rRNA helicases
FVA74_05275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QEE61052
UniProt:
A0A5B9G3S6
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All DBs
Position
complement(1118996..1120708)
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AA seq
570 aa
AA seq
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MTTLDTPTQADTDAASPQTTFSDLGLSDNVLRAVKDVGYETPSAIQAATIPVLLTGRDVV
GLAQTGTGKTAAFALPILSRLDPAQKTPQALVLSPTRELALQVCEAFEQYAAHLRGVSVL
PVYGGQAYGVQLSALRRGVHVVVGTPGRIMDHIAKGTLDLSELKYLVLDEADEMLKMGFA
EDVETILAETPDEKQVALFSATMPAAIRRISQKYLHDPEEITVKTKTTTSANVTQRYLIV
SYPQKVDALTRILEVENFEGMIVFVRTKSETENLAEKLRARGYSAAAISGDVAQAQRERT
VGQLKSGKLDILVATDVAARGLDVDRISHVVNFDIPIDTESYVHRIGRTGRAGRSGAAIS
FVTPRERRLLTAIERATRQPLTEMQLPSVEDVNVTRLARFDDAITAALSETGRISAFRDI
ITHYVQHHDVPELDVAAALAVVAQGETPLLLSKEDERPARQARFERDDRPERGERREPRS
RGGNSTYAPYRIEVGRRHKVEPRQIVGALANEGGFSREDFGAIKIMLDFSIVELPADLPR
DVLGKLQNTRISGKLIEIAPDRGRKQRRDR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctcgacacccccacgcaggccgataccgacgccgccagcccccagacgacg
ttctccgatctcggcctcagtgacaatgtcctgcgcgccgtcaaggacgtcggctacgag
accccctccgctatccaggccgcgacgattcccgtgctcctcacgggtcgcgacgtcgtc
gggctcgcccagacgggcaccggcaagaccgcggcattcgccctgcccatcctttctcgc
ctcgacccggcgcagaagacgccacaggcgctcgtgctctcccccactcgcgaactcgcg
ctccaggtctgtgaggccttcgaacagtacgcggcgcacctccgcggcgtgagcgtgctc
cccgtctacggcggccaggcctacggcgtgcagctctcggccctccgccgcggcgtgcac
gtcgtcgtcggcaccccgggccgcatcatggaccacatcgccaagggcaccctcgacctc
tccgagcttaagtacctcgtgctcgatgaggccgacgagatgctcaagatgggcttcgcc
gaagacgtcgagacgatcctcgccgagacgcccgacgagaagcaggttgccctgttctcg
gcgaccatgccagccgcgatccgtcgcatctcgcagaagtacctgcacgaccccgaagag
atcacggtcaagaccaagaccacgacctccgcgaacgtcacccagcgctacctcatcgtc
tcctacccacagaaagtcgacgcgctcacccgcatcctcgaggtcgagaacttcgagggc
atgatcgtcttcgtccgcaccaagagcgagacggagaacctcgccgagaagctccgcgcc
cggggctactccgccgccgcgatcagcggcgacgtcgcccaggcccagcgcgagcgcacg
gtcgggcagctcaagtcgggcaagctcgacatcctggtggcaacggatgtcgcggcgcga
ggcctcgacgtcgaccgcatcagccacgtggtcaacttcgacatccccatcgacaccgag
tcctacgtgcaccgcatcggccgcacgggtcgtgcgggacgcagcggagccgcgatcagc
ttcgtgaccccgcgcgagcgtcggctcctcacggcgatcgagcgtgcgacgcgccagccg
ctcaccgagatgcagctcccgagcgtcgaggacgtgaacgtcactcgcctcgcccgcttc
gacgacgccatcacggcggcgctgagcgagacgggccgcatctcggcgttccgcgacatc
atcacgcactacgtgcagcaccatgacgtgcccgagctcgacgtcgccgcggcgctcgcg
gtcgtcgcccagggtgagacgccgcttctcctctcgaaggaggacgagcgccccgctcgc
caggcgcgcttcgaacgcgacgaccggcccgagcgcggagagcgtcgcgagccccgatcg
cgcggcggcaactccacctatgcgccgtaccgcatcgaggtgggccgtcgccacaaggtc
gagccgcgccagatcgtcggcgcgctcgcgaatgagggcggcttcagccgcgaggacttc
ggtgcgatcaagatcatgctcgacttctcgatcgtcgagctgcctgccgacctgccccgt
gacgtgctcggcaagctccagaacacgcgcatcagcggcaagctcatcgagatcgccccg
gaccgcggccgcaagcagcgccgcgaccgctaa
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