Salinibacterium sp. dk2585: FVA74_05860
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Entry
FVA74_05860 CDS
T06151
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sald
Salinibacterium sp. dk2585
Brite
KEGG Orthology (KO) [BR:
sald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sald03019
]
FVA74_05860
Enzymes [BR:
sald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FVA74_05860
Messenger RNA biogenesis [BR:
sald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FVA74_05860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
Dhx29_hel
nSTAND3
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
QEE62583
LinkDB
All DBs
Position
complement(1246813..1249242)
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AA seq
809 aa
AA seq
DB search
MSPAERYAASRLRQGSPILEEFRAGLSFDLDPFQMEACAALESGDSVLVAAPTGAGKTIV
AEFAVYLAMKRANDKVFYTAPMKALSNQKFQEFVAEYGASEVGLLTGDTNINSGARIVVM
TTEVLRNMLYADSDLLRNLSFVVMDEVHYLADRFRGAVWEEVIIHLPQSVRLVSLSATVS
NAEEFGDWLQAVRGDTSVIVSEERPVPLDQHVLVRSKLIDLFDSSGQAATNRVNPELLQL
TSVGGRGSSRPPERGRARGRDRNRYHARQFEEGRLDRAQVVDLLGSKHLLPAIFFIFSRN
GCDQAVTQVLRAGVRLTDATERDEIREIVEERCRAIPDADLAVLGYWQWLDGLQRGVAAH
HAGMLPAFKEVVEELFQKKLVKAVFATETLALGINMPARTVVLEKLEKFNGEARVPITPG
EYTQLTGRAGRRGIDVEGHSVIQWQGGLDPQSVASLASRRTYPLNSSFSPTYNMAVNLIE
QFGRERTRDILESSFAQFQADRSVVSMARKVRTQEESLEGYAKAMECHLGDFEEYWSIRR
ELTDLERRVVRSDHGIRGEKERRQKQLNALRRRMKQHPCHSCSDREAHARWAERWSKLKK
QTDELRRQVTTRTGAVAKVFDRVTEVLLELGYLTRNGHGAVVVGEGGRILRRIYGERDLL
VAECIRRGLWDSLDTPGMAAMAAALVYEPRRDEQGADWNLPKGPFRAALDNTTTLWAQLD
DLETAHRLPGSNPVATGLSGPMYRWAQGASLDSVLRDAELAAGDFVRMTKQTIDLLDQLS
LVADAPVGSTARKALDAIRRGIVAYSSVG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgctgaacgctatgccgcgtcccgcctccggcagggttcccccatccttgaa
gagttccgggcggggctgtcgttcgatcttgacccgttccagatggaggcctgcgccgcc
ctcgagtcgggcgacagcgtgctcgtcgcagcgccgacgggcgcgggcaagacgatcgtc
gccgagttcgccgtctacctggcgatgaagcgcgccaacgacaaggtcttctacacggcg
cccatgaaggcgctgagcaaccagaagttccaggaattcgtcgccgagtacggtgcctcc
gaggtgggactcctcacgggtgacaccaacatcaactcgggtgcccgcatcgtcgtcatg
acgaccgaggtgctccgcaacatgctctatgcggattccgacctcctgcgcaatctctcc
ttcgtcgtcatggacgaggtccactacctcgccgaccgcttccgcggggccgtgtgggag
gaggtcatcatccacctcccgcagtccgtgcgtctcgtctccctgagcgcgacggtctcg
aacgccgaggagttcggtgactggctgcaggccgtgcgcggcgacacctccgtcatcgtc
tcggaggagcgccccgtgcccctcgaccagcacgtgctggtgcgcagcaagctcatcgac
cttttcgactcctccggccaggcggccactaacagggtgaaccccgagcttctccagctc
acctccgtcggcggccgcggcagcagtcgccctcccgagcggggtcgcgcgcgcggccgt
gaccgcaatcgctatcacgcccgccagttcgaggagggcaggctcgaccgcgcacaggtg
gtcgacctcctggggtcgaagcacctcctgccggcgatcttctttatcttcagccgcaac
ggatgcgaccaggccgtcacgcaggtgctgcgagccggcgttcgcctcacggatgccacg
gagcgtgacgagatccgcgagatcgtcgaggagcgctgccgcgcgattccggatgcggat
ctcgccgtgctcggctactggcagtggctcgatggtctccagcgaggtgtcgccgcccac
cacgcaggaatgctccccgctttcaaggaggtcgtggaagagctctttcagaagaaactc
gtgaaggccgtcttcgccaccgagacgctcgcgctcggcatcaacatgccggcgcgcacc
gtcgtgctggaaaagctcgagaagttcaatggcgaggctcgcgtgccgatcacgccgggc
gagtacacacagttgaccggacgagccggtcgacgcggcatcgatgtcgaaggccactcg
gtcatccagtggcaggggggcctcgacccgcagtcggttgcctctctcgcctcgcgccgc
acctacccgctgaattcgagcttctcgccgacctacaacatggcggtcaacctcatcgag
cagttcgggcgggagcgcactcgcgacatcctggagtcctccttcgcccagttccaggcc
gaccgctccgtcgtgtcgatggcccggaaggtgcgcacgcaggaggaatcgctcgagggc
tacgccaaagcgatggaatgccacctcggcgacttcgaggagtactggagtatccgccgc
gaactcaccgacctggagcgacgggtcgttcgcagcgaccacggcatccgtggcgagaag
gagcggcgacagaagcagctcaatgcgctccgccgacgcatgaagcagcatccctgccac
agctgcagcgaccgcgaggcgcacgcgcgctgggccgagcgctggtcgaagctcaagaag
cagacggatgagctgcgccgccaggttacgacccgcacgggtgccgtcgccaaggtcttc
gaccgcgtcacggaggtgctgctcgaactcggctacctgacacggaacgggcacggtgcc
gtcgtcgtgggggagggcggtcgcatcctgcgccgcatctacggtgaacgcgacctgctc
gtcgccgaatgcatccgccgaggactctgggactcgctcgacactcccggcatggcagcc
atggcggcagccctcgtgtacgagccccggcgtgacgagcagggtgccgactggaacctt
ccgaagggcccgttccgcgccgcgctcgacaacacgacgacgttgtgggcgcagctcgat
gacctcgagaccgcccaccgcctgcccggctccaaccccgtcgcgacggggctttccgga
cccatgtaccgctgggcgcagggtgcgtcgcttgacagcgtgctgcgcgatgccgagctc
gcggccggtgacttcgtgcgcatgacgaagcagacgatcgacctgctcgaccagctctcc
ctcgtcgccgacgcgccggtaggctcaacggcccgcaaggcgctcgacgccatccggcgc
ggcatcgtcgcctactcgagcgtgggctga
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