Salinibacterium sp. dk2585: FVA74_09370
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Entry
FVA74_09370 CDS
T06151
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sald
Salinibacterium sp. dk2585
Pathway
sald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVA74_09370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sald03021
]
FVA74_09370
03019 Messenger RNA biogenesis [BR:
sald03019
]
FVA74_09370
Transcription machinery [BR:
sald03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FVA74_09370
Messenger RNA biogenesis [BR:
sald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FVA74_09370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
QEE62649
LinkDB
All DBs
Position
complement(1997544..1999679)
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AA seq
711 aa
AA seq
DB search
MRVPELQALAASLGISGATKLRKGALVDAINETQNTQSSADAEQSSAPQADAAPQAETAS
QPAPSQNESSERQQAVAAATTSPRKRAPRRATAADGVITTTSAAAETEAAPAEAPAGEPV
AEKPARKAPARKRTSPKSATDHANGGESGVDTPAAEAGAGQQSDASDASADAAAPAQKTQ
GRRGKGRGESEKTGASKAAESGDQREQQEASHQERQAQDAAERNGREQNGDQNGADKNGG
AADRDGDDSGDDSGDRPQRSRNRNRNRKGSDRGNDQQQKDEQQGDQNDRGRGRQQQGDDT
ERGGRGRYRDRKRRGGGDDFEPEISEDDVLIPVAGILDVLDNYAFVRTTGYLPGNNDVYV
SLGQVKKYHLRKGDAIVGAIRQPRDGDNQGGRQKYNAIVKIDSINGLPIEQAGERVHFGD
LTPLYPSERLRLETEQQKLTTRIIDLVSPIGKGQRGLIVSPPKAGKTLVLQAIANSIAKN
NPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGH
DVVVLLDSITRLGRAYNLAAPASGRILSGGVDSSALYPPKRFFGAARNIEDGGSLTILAT
ALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTRREEMLMGVDEVK
VTWKLRRALAGLDTQQALEIVLGKLRETQSNVEFLMQIQKSLPGASANKED
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccccgagcttcaggctcttgcggcgtccctcggcatcagtggcgcgaccaaa
cttcgcaaaggagccctcgtggacgcaatcaacgagacccagaacacgcagtcgtcggcc
gacgcggagcagagctccgcaccccaggctgacgctgcaccccaggccgagacggcttcg
cagcccgcgccgagccagaatgaatcctctgagcgccagcaggccgtagcggccgcgacg
acgtcgccgcgcaagcgtgcgccgcgacgggcgacggcagccgacggcgtcatcacgacg
acgagcgcggcagctgagaccgaggcagcaccggctgaggcgcccgcgggcgagcccgtc
gccgagaagccggcgcgcaaggcgcccgcgcgcaagcgcacctcgcccaagtcggcgacc
gaccacgccaacggtggcgagtccggcgtcgacacgcccgctgccgaagctggcgcaggc
cagcagtcggatgccagtgacgcgagcgccgacgctgcggctccggcgcagaagacgcag
ggccgccgcggcaagggtcgcggcgagtccgagaagaccggtgcttcgaaggccgccgag
agcggcgaccagcgcgagcagcaggaggcctcgcaccaggagcgccaggcccaggatgcc
gccgagcgcaacgggcgcgagcagaacggtgaccagaacggtgccgacaagaacggcggc
gccgccgaccgcgacggcgacgactcgggcgacgactcgggcgaccgtccccagcgcagc
cgcaaccgcaaccgcaaccgcaagggcagcgaccgcggcaacgaccagcagcagaaagac
gagcagcagggcgaccagaacgaccgtggtcgtgggcgccagcagcagggagacgacacc
gagcgcgggggacgaggccgttaccgcgaccgcaagcgtcgcggcggcggcgacgacttc
gagccggaaatcagcgaggatgacgtgctcatccccgtcgccggcatcctcgatgtgctc
gacaactacgccttcgtgcgcacgacgggctaccttcccggcaacaacgacgtctacgtc
tccctcggccaggtcaagaagtaccacctgcgcaagggcgacgcgatcgtcggcgccatc
cgccagccgcgcgacggcgataaccagggcggccgccagaagtacaacgcgatcgtcaag
atcgactcgatcaacgggctccccatcgagcaggccggcgagcgggtgcacttcggtgac
ctgacgccgctctacccctcggagcgcctgcgcctcgagaccgagcagcagaagctgacc
acccgcatcatcgacctcgtgtcgccgatcggcaagggccagcgcggcctcatcgtctcg
ccgcccaaggcaggcaagaccctcgtgctgcaggccatcgcgaactcgatcgccaagaac
aaccccgaggtccacctcatggtcgtcctggtcgacgagcggcccgaagaggtcaccgac
atgcagcgcaccgtcaagggtgaggtcatcgcctccaccttcgaccggccggctgaggac
cacaccacggtcgccgagctcgcgatcgagcgcgccaagcgtctcgtcgagctcggacac
gacgtcgtcgtgctcctcgactcgatcacccgccttgggcgcgcctacaacctggcggct
cccgcctccggtcgcatcctctcgggtggcgtcgactcctcggcgctctacccgccgaag
cgcttcttcggtgccgcgcgcaacatcgaggacggcggctcgctgacgatcctcgcgacg
gcgctcgtcgagaccgggtccaagatggacgaggtcatcttcgaagagttcaagggcacc
ggcaacatggagctccgcctctcgcgccagctggccgacaagcgcatcttccctgccgtc
gacgtcaacgcatccggaacccgccgcgaggagatgctcatgggcgtcgacgaggtcaag
gtcacctggaagctgcgtcgtgccctcgcgggcctcgacacgcagcaggcgctcgagatc
gtgctcggcaagctgcgtgagacgcagtcgaacgtcgagttcctcatgcagatccagaag
tccctcccgggcgcctcggcgaacaaggaggactga
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