Streptomyces alboflavus: SMD44_01970
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Entry
SMD44_01970 CDS
T05221
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salf
Streptomyces alboflavus
Pathway
salf03030
DNA replication
salf03430
Mismatch repair
salf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMD44_01970
03430 Mismatch repair
SMD44_01970
03440 Homologous recombination
SMD44_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salf03032
]
SMD44_01970
03400 DNA repair and recombination proteins [BR:
salf03400
]
SMD44_01970
Enzymes [BR:
salf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMD44_01970
DNA replication proteins [BR:
salf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMD44_01970
DNA repair and recombination proteins [BR:
salf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMD44_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARX82557
UniProt:
A0A1Z1W808
LinkDB
All DBs
Position
2122510..2123628
Genome browser
AA seq
372 aa
AA seq
DB search
MLEDRTTASPTAPTVPSATPATHATPAPTAATAPGSETPWPTAYPSGYAVVDVETTGLSR
DDRIISAAVYRLDARGEVEDHWYTLVNPQRDPGPVWIHGLTSDKLADAPLFADIAEEFAT
RLADRVLVAHNAVFDWSMIAREYARAERTAPVRQRLCTIALSKELGLPLPNHKLESLAAH
FGVVQRQAHHALDDARVLAEAFRPSLRAAASDGVRLPLLECRPLTEWSDGGARIGRQGGP
ATGSSTSSFSAYSSYQSGSWRPSRKRPACPFPNPGRWEDGKPLKQGMRVAFSGDTSVDRE
LLEDRAFEAGLHIATSVSRLTSLLVTNDPDSGTSKTTKARAYGTPVIDEAAFGQLLQDVA
PAETPAGTPGER
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgcacgaccgcatcgccgacggcgccgaccgtcccttcggcgactccg
gcgacgcacgcgactccggcgccgaccgccgcgaccgcgccggggtccgagaccccctgg
ccgaccgcctacccctccgggtacgcggtcgtcgacgtcgagaccaccggcctgtccaga
gacgaccggatcatctcggccgcggtctaccgcctggacgcccgcggcgaggtcgaggac
cactggtacacgctggtgaacccgcagcgcgaccccggcccggtctggatccacggtctg
acgagcgacaagctggccgacgccccgctcttcgcggacatcgccgaggagttcgcgacc
cgcctcgccgaccgcgtcctcgtcgcgcacaacgccgtcttcgactggtcgatgatcgcc
agggagtacgcccgcgcggagcgcaccgcccccgtccgccagcgcctgtgcaccatcgcg
ctctccaaggagctcggcctgccgctgcccaaccacaagctggagtccctcgcggcccac
ttcggcgtcgtccagcgccaggcccaccacgccctcgacgacgcccgggtcctcgccgag
gcgttccggccgagcctgcgcgcggcggcgagcgacggggtgcggctgccgctcctggag
tgccgcccgctcaccgagtggtcggacggcggcgcccgcatcggccgccagggcgggccc
gccaccggctcctccacatcgtcgttctcggcgtactcctcgtaccagtccggcagttgg
cgcccctcccgcaagcgccccgcctgcccgttcccgaaccccgggcggtgggaggacggc
aagccgctcaagcagggcatgcgcgtcgccttctccggggacacctccgtggaccgcgag
ctcctggaggaccgggcgttcgaggcgggcctgcacatcgcgacgagcgtgtcgcggctg
acgagcctcctcgtcacgaacgacccggactccggcacgtcgaagacgacgaaggcccgg
gcgtacggcactccggtcatcgacgaggcggccttcggccagctcctccaggacgtggcc
ccggcggagaccccggcaggaaccccgggagaaaggtga
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