KEGG   Streptomyces alboflavus: SMD44_06195
Entry
SMD44_06195       CDS       T05221                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
salf  Streptomyces alboflavus
Brite
KEGG Orthology (KO) [BR:salf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salf03032]
    SMD44_06195 (hupB)
   03036 Chromosome and associated proteins [BR:salf03036]
    SMD44_06195 (hupB)
   03400 DNA repair and recombination proteins [BR:salf03400]
    SMD44_06195 (hupB)
DNA replication proteins [BR:salf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SMD44_06195 (hupB)
Chromosome and associated proteins [BR:salf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SMD44_06195 (hupB)
DNA repair and recombination proteins [BR:salf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SMD44_06195 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: ARX86718
UniProt: A0A1Z1WJZ2
LinkDB
Position
6744160..6744840
AA seq 226 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGTKTTAKAA
TKKATAKKATAKKTTAKKTTAAKKATTAKKATTAKKATTAKKAAKTATAKKTTAKKTAKA
ATAKKTTAKKAAAKKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggtggccgtcagcaggcc
gccgacgccgtggacgcggttctggacgccatcgtccgtgccgtcgtcagtggagaccgt
gtttcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggctcggtacgcccgc
aacccgcagaccggggagcgcgttcgggtcaagaagacctcggtgccgcgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtggcg
gtcaagaaggcgcccaagggcagcctttcgggcggcaccaagaccaccgccaaggcggcc
accaagaaggccaccgccaagaaggccaccgccaagaagacgacggcgaagaagaccacc
gccgccaagaaggccaccaccgccaagaaggcgacgacggccaagaaggccaccaccgcc
aagaaggcggcgaagacggccacggccaagaagaccacggccaagaagacggccaaggcg
gccacggcgaagaagaccaccgccaagaaggccgccgccaagaaggcgcccgccaagaag
gccacggccaagaaggcgcccgccaagaagtccacggcgcgcaagaccaccgccaagaag
gccaccgcccgcaagaagtaa

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