Streptomyces alboflavus: SMD44_06195
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Entry
SMD44_06195 CDS
T05221
Symbol
hupB
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
salf
Streptomyces alboflavus
Brite
KEGG Orthology (KO) [BR:
salf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salf03032
]
SMD44_06195 (hupB)
03036 Chromosome and associated proteins [BR:
salf03036
]
SMD44_06195 (hupB)
03400 DNA repair and recombination proteins [BR:
salf03400
]
SMD44_06195 (hupB)
DNA replication proteins [BR:
salf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SMD44_06195 (hupB)
Chromosome and associated proteins [BR:
salf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SMD44_06195 (hupB)
DNA repair and recombination proteins [BR:
salf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SMD44_06195 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
ARX86718
UniProt:
A0A1Z1WJZ2
LinkDB
All DBs
Position
6744160..6744840
Genome browser
AA seq
226 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGTKTTAKAA
TKKATAKKATAKKTTAKKTTAAKKATTAKKATTAKKATTAKKAAKTATAKKTTAKKTAKA
ATAKKTTAKKAAAKKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggtggccgtcagcaggcc
gccgacgccgtggacgcggttctggacgccatcgtccgtgccgtcgtcagtggagaccgt
gtttcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggctcggtacgcccgc
aacccgcagaccggggagcgcgttcgggtcaagaagacctcggtgccgcgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtggcg
gtcaagaaggcgcccaagggcagcctttcgggcggcaccaagaccaccgccaaggcggcc
accaagaaggccaccgccaagaaggccaccgccaagaagacgacggcgaagaagaccacc
gccgccaagaaggccaccaccgccaagaaggcgacgacggccaagaaggccaccaccgcc
aagaaggcggcgaagacggccacggccaagaagaccacggccaagaagacggccaaggcg
gccacggcgaagaagaccaccgccaagaaggccgccgccaagaaggcgcccgccaagaag
gccacggccaagaaggcgcccgccaagaagtccacggcgcgcaagaccaccgccaagaag
gccaccgcccgcaagaagtaa
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