KEGG   Streptomyces alboflavus: SMD44_06381
Entry
SMD44_06381       CDS       T05221                                 
Symbol
lhr
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
salf  Streptomyces alboflavus
Brite
KEGG Orthology (KO) [BR:salf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salf03400]
    SMD44_06381 (lhr)
Enzymes [BR:salf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SMD44_06381 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     SMD44_06381 (lhr)
DNA repair and recombination proteins [BR:salf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SMD44_06381 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: ARX86900
UniProt: A0A1Z1WKI8
LinkDB
Position
complement(6960623..6964288)
AA seq 1221 aa
MVRSARSHDDALNGFSPATRGWFTGAFSAPTSAQAGAWRAIAEGSDVLVVAPTGSGKTLA
AFLAALDQLASTPPPADPKQRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEP
EVRVGIRSGDTPAAERRALATRPPDILITTPESLFLMLTSATRDALTGIETVILDEVHAV
AGTKRGAHLALSLERLDALLKRPARRIGLSATVRPVDEVARYLSPQRRVEIVQPKSGKEF
DLSVVVPVEDLGELGGSPATDSDENAERPSIWPHVEERITDLVQAHRSTIVFANSRRLAE
RLCNRLNEIAYERATGEALPDDQSPAEVMAQSGAAQGAPPVLARAHHGSVSKEQRAQVEE
DLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVF
PKYRGDLVQAAVVTERMRTGAIESLRVPANPLDVLAQQLVAMVALDSWQVDDLLALVRRA
APFASLPESAFTSVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAVTSGGTI
PDRGLFGVFLAGADPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSP
APGVPGRLPFWKGDQLGRPLELGRALGAFLREVGSLPQDDARDRLLAAGLDTWAADNVLT
YLAEQREACGHIPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLTERYGM
DAQVMHADDGIVLRLPDADLMGLDLLDQDPADLGPTVDSTLDPDKAPVGAGDVAFDKGEV
GQIVTDQVGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLEVTSEFGSFP
IVLEAVRECLQDVFDVPGLTELMGDIESRRVRLVEVTTPEPSPFARSLLFGYVAQFLYEG
DSPLAERRAAALSLDSRLLAELLGQAELRELLDADVLATLEQELQWLTDDRRVKDAEGVA
DLLRLLGPLTDAELADRGAEPAWAEQLAGARRAIRVRVGGGDHWAAIEDAGRLRDALGTA
LPVGVPEAFTEPVKDPLGDLLARYARTHGPFTSAAAAARFGLGAAVTDGALHRLAANGRV
VQGEFHPAGIGQEWCDATVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHLSGHGLRG
ADGLVRAIEQLQGASVPASALEKLVLPSRVTGYAPAMLDELTAAGEVVWAGAGALPGKDG
WISLYLAESAPLLLPPRTPWS
NT seq 3666 nt   +upstreamnt  +downstreamnt
atggtcaggtccgctcgcagtcacgacgacgccctcaacggcttctcccccgcgacccgc
ggctggttcacgggggccttctccgcgcccacgtccgcccaggccggggcgtggcgggcg
atcgcggagggctcggacgtgctggtggtcgccccgaccggctccggcaagaccctggcc
gccttcctcgccgccctggaccagctggcctcgaccccgcccccggccgaccccaagcag
cgctgccgcgtgctgtacgtatccccgctgaaggccctcgcggtcgacgtggagcgcaat
ctgcgcagcccgctcacgggcatccgccaggagtcggtgcgcctcggcctgcccgagccc
gaggtgcgggtgggcatccgctccggagacaccccggcggccgagcgccgagccctggcc
acgcgtccgccggacatcctgatcacgacgccggagtcgctgttcctgatgctcacgtcg
gccacccgggacgcgctcacgggcatcgagacggtgatcctggacgaggtgcacgccgtg
gcgggcaccaagcgcggggctcatctggcgctgtccctggagcggctcgacgcgctcctg
aagcgccccgcccgtcgtatcggcctgtcggcgacggtccgccccgtggacgaggtcgcc
cgctatctgtcgccgcagcgccgggtggagatcgtccagccgaagtcgggcaaggagttc
gacctctccgtggtggtgccggtcgaggacctcggcgagctgggcggctcaccggcgacc
gactccgacgagaacgccgagcgcccctcgatctggccgcacgtcgaagagcgcatcacc
gacctcgtgcaggcgcaccgctcgacgatcgtcttcgccaactcccgccgcctggcggag
cgcctgtgcaaccggctcaacgagatcgcctacgaacgcgcgacgggcgaggccctcccg
gacgaccagagcccggcggaggtgatggcacagtccggcgccgcccagggggcaccgccc
gtcctcgcccgcgcacaccacggctcggtctccaaggagcagcgcgcccaggtcgaggag
gacctgaaggcaggccgcctgcccgcggtcgtcgccacgtccagcctggagctgggcatc
gacatgggcgcggtggacctggtggtgcaggtcgagtcgccgccctccgtggcgtccggc
ctgcagcgggtgggccgcgcggggcaccaggtgggcgcggtctccacgggcgtcgtcttc
ccgaagtaccgaggcgacctggtccaggccgccgtcgtcacggagcggatgcgcacgggc
gccatcgagtcgctgcgggtccccgccaaccccctggacgtgctggcccagcagctggtc
gcgatggtcgccctggacagctggcaggtggacgacctgctggccctggtccgccgtgcc
gcgccgttcgcctcgctcccggagtcggcgttcacctccgtcctcgacatgctcgccggc
cgctatccgtccgacgccttcgcggagctgcgcccgcgcgtggtgtgggaccgcgtcgcg
ggcacggtcacggggcgtccgggggcacagcgcctggcggtcacctccgggggcacgatt
cccgaccgcggcctgttcggggtcttcctcgcgggcgccgacccgaagaagggcggcggc
cgcgtcggcgagctcgacgaggagatggtctacgaatcccgcgtgggcgacgtcttcact
ctcggtacgagctcctggcgcatcgaggacatcacgcgcgaccgcgtcctcgtctccccg
gcgcccggcgtccccggaaggctgccgttctggaagggcgaccagctgggccgcccgctc
gaactgggccgtgcactcggcgcgttcctgcgcgaggtcggctcactgccgcaggacgac
gcacgcgaccgcctcctcgccgcgggcctcgacacctgggccgcggacaacgtcctgacg
tacctcgccgagcagcgcgaggcctgcgggcacatcccggacgaccgcacgatcgtggtg
gagcgcttccgcgacgagctgggcgactggcgcgtggtggtgcactccccgttcggcgcc
caggtgcacgccccttgggccctcgccctcggcgcccgcctcaccgagcggtacggcatg
gacgcccaggtcatgcacgccgacgacggcatcgtgctgcgcctgcccgacgccgacctg
atgggcctcgacctgctcgaccaggacccggccgacctcggcccgaccgtggactcgacg
ctcgatccggacaaggcacccgtgggcgcgggggacgtggccttcgacaagggcgaggtc
ggccagatcgtcaccgaccaggtgggcggctccgcgctgttcgcctcccgcttccgcgag
tgcgccgcccgcgcgctgctgctgccgcgccgcagccccggcaagcgcacccccctgtgg
cagcagcgccagcgcgccgcccagctcctggaggtcaccagcgagttcggttccttcccg
atcgtcctggaggcggtcagggaatgcctccaggacgtcttcgacgtaccgggtctgacc
gagctgatgggcgacatcgagtcccgccgcgtccgcctcgtcgaggtcaccaccccggag
ccgtcccccttcgcccgctccctcctgttcgggtacgtggcgcagttcctgtacgagggc
gactcaccgctcgccgagcgccgcgccgccgccctgtccctggactcccgcctcctggcc
gagctgctcggccaggccgagctgcgcgagctactcgacgcggacgtgctcgccaccctg
gagcaggaactccagtggctcaccgacgaccgccgtgtcaaggacgccgaaggcgtggcc
gatctgctgcgcctcctcggtccgctcacggacgccgagctggccgaccggggcgcggag
cccgcgtgggccgagcagctggcgggcgcccgccgggccatccgggtccgcgtcggcggc
ggcgaccactgggcggcgatcgaggacgcggggcgcctgcgggacgcgctcggcacggca
ctgccggtcggcgttccggaggccttcaccgagcccgtcaaggaccctttgggcgacctc
ctggcgcgctatgcccgcacgcacggcccgttcacgtccgccgcggccgccgcccgcttc
ggcctgggcgcggcggtcacggacggggccctgcaccgcctcgcggcgaacggccgtgtc
gtacagggcgagttccaccccgccgggatcggccaggagtggtgcgacgcgaccgtcctg
cgccgactgcgccgccgctccctcgcggccctgcggcacgaactggaaccggtgccaccg
gccgccctcgcccaattcctgccccagtggcagcacttgagcgggcacgggcttcgcggg
gccgacggcctggtgcgcgccatcgagcagctccagggcgcgtcggtcccggcgtcagcc
ctggagaagctcgtcctgccctcccgggtcaccgggtacgcccccgcgatgctcgacgag
ctgacggcggccggggaggtggtctgggcgggcgccggagccctcccgggcaaggacggc
tggatcagcctctacttggcagaatcggcccccctcctgctcccgccccgcaccccctgg
agctga

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