Streptomyces alboflavus: SMD44_07689
Help
Entry
SMD44_07689 CDS
T05221
Symbol
mutM
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
salf
Streptomyces alboflavus
Pathway
salf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD44_07689 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salf03400
]
SMD44_07689 (mutM)
Enzymes [BR:
salf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SMD44_07689 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SMD44_07689 (mutM)
DNA repair and recombination proteins [BR:
salf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMD44_07689 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
ARX88202
UniProt:
A0A1Z1WPG1
LinkDB
All DBs
Position
8479354..8480232
Genome browser
AA seq
292 aa
AA seq
DB search
MRGEAVVPELPEVEALRDFLAEELTGREIVRVLPVAISVLKTYDPPVTALEGREVTGVAR
HGKFLAVDAGGLWLVTHLARAGWLQWKDPLPSGAPKPGKGPLALRVALATGAGFDLTEAG
TQKRLAVYVTDDPAALPGIARLGPDPLAADFTLERFAGLLDGERRRVKGALRDQSLIAGI
GNAYSDEILHAARMSPYKLAGSLSEEETRRLYEALRATLDEAVARSRGLAAARLKSEKKS
GLRVHGRAGQPCPVCGDTIREVSFADSALQYCPTCQTGGKPLADRRMSRLLK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaggggtgaggcggtcgtgccggaactgccggaggtcgaggccttgcgggacttcctc
gccgaggagctgaccgggcgtgagatcgtgcgggtgctgccggtggccatcagcgtcctg
aagacgtacgacccgccggtgaccgcgctcgaagggcgcgaggtgacgggcgtcgcccgc
cacggcaagttcctcgccgtcgacgcgggcgggctgtggctcgtcacgcatctcgcccgg
gcgggctggctccagtggaaggacccgctgccgagcggcgcgccgaagcccggcaagggc
cccctggcgctgcgcgtggcgctcgcgaccggcgcgggcttcgacctcaccgaggccggt
acgcaaaagcgcctcgccgtgtacgtcaccgacgaccccgcggcgctgcccggcatcgcc
cgcctcggccccgaccccctagccgcggacttcaccctggagcggttcgcggggctcctg
gacggcgaacggcgccgcgtcaagggtgcgttgcgcgaccagagcctgatcgcgggcatc
ggcaacgcctacagcgacgagatcctgcacgccgcccgtatgtcgccgtacaagctcgcg
ggcagcctctccgaggaggagacacggcgtctgtacgaggcgctgcgggcgacgctggac
gaggcggtggcgcgctcgcgcgggctcgccgcggcgcggctgaagtccgagaagaagtcc
ggcctgcgcgtgcacggacgggccgggcagccgtgcccggtctgcggcgacacgatccgc
gaggtctccttcgcggactccgccctccagtactgccccacctgccagaccggcggcaag
ccgctggcggaccgccgcatgtcgcgactcctcaagtag
DBGET
integrated database retrieval system
