Streptomyces alboflavus: SMD44_p10023
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Entry
SMD44_p10023 CDS
T05221
Symbol
hupB
Name
(GenBank) histone-like DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
salf
Streptomyces alboflavus
Brite
KEGG Orthology (KO) [BR:
salf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salf03032
]
SMD44_p10023 (hupB)
03036 Chromosome and associated proteins [BR:
salf03036
]
SMD44_p10023 (hupB)
03400 DNA repair and recombination proteins [BR:
salf03400
]
SMD44_p10023 (hupB)
DNA replication proteins [BR:
salf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SMD44_p10023 (hupB)
Chromosome and associated proteins [BR:
salf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SMD44_p10023 (hupB)
DNA repair and recombination proteins [BR:
salf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SMD44_p10023 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ATM24522
UniProt:
A0A291W4P5
LinkDB
All DBs
Position
pMDJK44.1:17043..17381
Genome browser
AA seq
112 aa
AA seq
DB search
MNKQQLIEQMAANGGVTRAQAAHSLDLVLDTLVREVIDGNDVSVTGFGKLAAVRTHARRG
RNPQTGEPILVPASKRIKFTPGSAFTAMARGTRPVPVGRSAASKRPKTADNG
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaagcagcaactgatcgaacagatggcggccaacggcggcgtcaccagggcccag
gcagcacactcgctcgacctggtactggacacgctggtccgggaagtcatcgacggcaac
gacgtctccgtgaccggcttcggcaaactcgccgccgtccgcacccacgcccggcgcgga
cgcaacccccagaccggcgaaccgatcctcgtccccgcgagcaagcgcatcaagttcacc
ccaggcagcgcattcaccgccatggcccgtggaacgcgtcccgtgccggtcgggcgcagc
gccgcgagcaagcgtcccaagacggcggacaacgggtaa
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