KEGG   Streptomyces alboflavus: SMD44_p10107
Entry
SMD44_p10107      CDS       T05221                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
salf  Streptomyces alboflavus
Pathway
salf03030  DNA replication
salf03430  Mismatch repair
salf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:salf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SMD44_p10107
   03430 Mismatch repair
    SMD44_p10107
   03440 Homologous recombination
    SMD44_p10107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salf03032]
    SMD44_p10107
   03400 DNA repair and recombination proteins [BR:salf03400]
    SMD44_p10107
Enzymes [BR:salf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SMD44_p10107
DNA replication proteins [BR:salf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SMD44_p10107
DNA repair and recombination proteins [BR:salf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SMD44_p10107
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ATM24606
UniProt: A0A291W4M3
LinkDB
Position
pMDJK44.1:complement(92634..93296)
AA seq 220 aa
MGGLTHDPAFQATTFVVIDFETTTPTGHPAQPIEVAALALRCTDGQWVEAGRSTSLIRPP
GFAPVTPADTAQTGLTAHELEQAPTPAEALSALDRRFTADRPYLLVAQHATTEANVIHHQ
RAHCPALARIDLLDTIPLAKHLVPGLLNYRLDTLLAHFGIPQPPDRHRAPADVDVTAQLF
LRLIAAAKDSPQLSDLAALVKLAGRTARCNQPAQEELFDL
NT seq 663 nt   +upstreamnt  +downstreamnt
atgggcggcctgacacacgatcccgctttccaggcgaccacgttcgtggtcatcgacttc
gagacgacgaccccgaccggccacccggcccagcccatcgaggtcgccgcgctcgccctc
cgctgcaccgacggccagtgggtggaggcgggcaggagcacctcgctcatccggccaccc
ggcttcgcccccgtgaccccggcggacaccgcccaaacgggtctgaccgcgcacgagttg
gagcaggcacccaccccggccgaggcactgagcgcgctggaccggcgcttcacagcagac
cggccctacctgctggtggcccagcacgccacaaccgaggccaacgtcatccaccaccag
cgcgcccactgccccgccctggcccgcatcgacctcctcgacacgatcccgctcgccaag
cacctcgtcccgggcctgctgaactaccggctcgacacactgctggcgcacttcggcatc
ccgcagccaccggatcgccaccgagcccccgccgacgtcgacgtcaccgcgcagctgttc
ctgcgcctcatcgccgcagcgaaggacagcccccagctcagcgatctcgccgccctggtg
aagctcgccggacgcaccgccaggtgcaaccagcccgcacaggaagaactgttcgacctc
tag

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