Shewanella algae: BS332_00180
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Entry
BS332_00180 CDS
T05622
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salg03016
]
BS332_00180
Enzymes [BR:
salg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BS332_00180
Transfer RNA biogenesis [BR:
salg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BS332_00180
Prokaryotic type
BS332_00180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXQ13021
UniProt:
A0A5N5U0Q6
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All DBs
Position
complement(36225..37289)
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AA seq
354 aa
AA seq
DB search
MNSLHFLYGKPLSKGDMRTSNSDFQVQEILPFLPSGEGEHHLLHIRKDGLNTVQVAEMLA
KLAKVHPKEVTFAGQKDKNAITEQWFGVRIPGKETPDWLSLNSESITVLSAARHNKKLRI
GALSGNRFKLVLRQITQPEDVLQRLESIAEGGVPNYFGEQRFGHNGRNIEMARQMLQGRK
VKDRNKRSIYLSALRSLLFNQLVSQRLATHGLECLDGDCVMLAGSRSFFVAERWDEVLQQ
RLAEKDILLSAPMWGRGQPLSSADALAFEAQVLAEYSADCEGLEKAGLEQERRPLLLRPE
GMKYQFIEPDTLELEFSLPAGSFATSVLRELLDYDDVTERLWRERQAAQEGNPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattacactttctctatggcaagcctctctccaaaggcgatatgcgcaccagc
aacagcgattttcaggtgcaggaaatactgccttttctgccctcgggcgagggtgagcac
catctgctgcatattcgtaaagatggcctgaatacggttcaggtggccgagatgctggcc
aaattggccaaggtgcatcccaaagaggtgacctttgccggccagaaggataagaatgcc
atcacagagcagtggttcggcgtacgaattccgggtaaagaaacaccggattggctgagt
ctcaacagtgagtccatcacggtattgagtgcggcgcgtcataacaagaagctgcgcatt
ggtgcgctttccggtaaccgtttcaagctggttctgcgccagataactcagccggaagat
gtattgcagcggctggagtcgattgccgaggggggcgtacccaactatttcggtgaacag
cgctttggccacaacggccgcaacatagaaatggcgcggcagatgctgcaggggcgcaag
gtgaaagacagaaacaaacgctccatctacctgtcggcgctgcgctcattattgtttaat
caactggtatctcagcgcctggcgacccatgggcttgagtgtctggacggtgattgtgtc
atgctggccggcagccgcagcttctttgttgccgagcgctgggatgaggtgttgcaacaa
aggctggcagagaaagatattttgctgtcggcgcccatgtggggtagggggcagccactc
agcagtgccgatgccttggcttttgaggctcaggttctggccgaatacagcgctgattgt
gaaggcctggaaaaagccgggctcgagcaggaaaggcgaccactgttgttgcgtcccgaa
gggatgaagtaccagtttatcgagccggacacactggagctggagttcagccttcctgcg
ggcagctttgcaacctcagtgctgcgggaactgctcgactatgatgatgtgaccgaacgt
ctgtggcgtgagcgccaggcggctcaggaaggaaaccctgcatga
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