Shewanella algae: BS332_00990
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Entry
BS332_00990 CDS
T05622
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
salg
Shewanella algae
Pathway
salg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS332_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_00990
Enzymes [BR:
salg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BS332_00990
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BS332_00990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AXQ13152
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All DBs
Position
228891..229745
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AA seq
284 aa
AA seq
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MTSQERWVGAHVSAQGGVENAPLNAHKIGASAFALFTKNQRRWQAAPLTEQSIAAFQENC
QKLGFRPEAILPHDSYLINLGHPDPLLLEKSRDAFVDEMLRCKQLGLTLLNFHPGSHLRQ
ISENHCLRNISDSINLALAACDGVCAVIENTAGQGSNLGHRFEQLAQIIDGVEDKSRVGV
CLDTAHMFAAGYDIRTQESCRESFDAFGRIVGFQYLKGMHLNDSKTGLGSRVDRHDSLGM
GEIGKTAFEYILGHPATKGIPLILETIRPEIWPEEIAWLNSLSR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagtcaggaaaggtgggttggagcccatgtcagcgcccagggtggtgtggaaaat
gctccgctcaatgcccacaagataggggccagtgcctttgcactgtttaccaagaatcaa
cgtcgctggcaggcagcacctttaaccgagcagtccatcgccgcctttcaggaaaactgc
caaaaattggggttcagacccgaggcgattctaccccacgacagctatctgattaacttg
ggacacccggatcccttgctgctggaaaaatcccgcgatgcctttgtcgatgagatgctt
cgttgcaaacagttaggattaaccttgctgaactttcatcccggcagccacttgcgacag
ataagtgaaaaccactgtctgcgtaacatcagcgattcaatcaacctggcattggcagct
tgtgatggcgtctgtgccgtcatcgaaaataccgcgggacaaggctccaacctgggacac
agatttgaacaactggcgcagatcattgacggggttgaggataaatccagagtcggtgtt
tgcctggataccgcccatatgtttgccgcgggttacgacattcgcactcaggaaagctgc
cgggaaagctttgacgcctttggccgcatagtgggctttcaatacctcaagggcatgcac
ctcaacgacagcaagacgggactcggcagccgggtcgatcgccacgactccctgggcatg
ggcgaaataggcaaaaccgctttcgagtatattctcggccacccagccaccaaggggata
cccttgatattggaaaccatacgcccggagatctggcccgaagaaattgcctggctgaac
agccttagccgctaa
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