Shewanella algae: BS332_05460
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Entry
BS332_05460 CDS
T05622
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_05460
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BS332_05460
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
Bclx_interact
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AXQ16547
LinkDB
All DBs
Position
complement(1228523..1228999)
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AA seq
158 aa
AA seq
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MTIFSKSQQMSHIRGEDTRPEMWLRKRLHALGYRFRLHEKRLPGKPDLVLPKYHAIILVN
GCFWHMHQCRYFQFPRSSSIQNRGPEWWRSKLLGNRARDLAAQDKLRELGWRVLVLWECA
IKGKERRPETEVIQTVIQWLHSDIHYLEISPAETVQKS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttttagcaaaagccaacaaatgtcccacattcggggtgaggacacccgccct
gagatgtggctgagaaagcggctccacgcattgggataccgctttcgtttgcatgaaaaa
cgcttgccgggaaagccggatctggtcttgcccaagtatcacgccattattttggttaat
ggctgtttctggcatatgcatcagtgccgttattttcaatttcccaggtcatcgtccatt
caaaatagagggcctgagtggtggcggagcaaactcttgggcaacagagccagggacttg
gcggcacaggacaagctgcgtgagctcggttggcgggttctggtgctgtgggagtgtgct
atcaagggtaaggaaaggcggcccgaaaccgaagtcattcagacagttattcagtggtta
cattcagatatccattatcttgaaatatctcctgctgaaacagtacaaaaatcctga
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