Shewanella algae: BS332_05910
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Entry
BS332_05910 CDS
T05622
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
salg
Shewanella algae
Pathway
salg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BS332_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salg03021
]
BS332_05910
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_05910
Enzymes [BR:
salg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BS332_05910
Transcription machinery [BR:
salg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BS332_05910
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BS332_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AXQ13911
UniProt:
A0A2T3GWU6
LinkDB
All DBs
Position
complement(1319189..1320178)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVNPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGLAVIIEGKDEAMLTLSKSGAGPVTAADITHDGD
VTIVNPDHVICHLTGNNDISMRIRVERGRGYVPASARAQTEDDDRPIGRLLVDASFSPVA
RIAYNVEAARVEQRTDLDKLIIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVTEPE
QKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLADDL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttcttaaaccgcgtctcgttgatatcgagcaggttaac
ccaactcgtgccaaggtgactctggagccactcgagcgtggtttcggtcatactttgggt
aacgcgttgcgtcgcatcctattgtcgtctatgcccggctgcgcggttaccgaagtcgag
atcgacggcgtactgcatgaatacagcagtaaggaaggcgtacaagaagatatccttgaa
atattgctgaacctgaaagggctggcagtcattatcgagggtaaagacgaggctatgctc
actctgagcaagtccggcgcaggccctgttaccgcagccgacatcacccacgacggcgat
gtcacaatcgtgaacccggatcatgttatctgtcatctgactggtaacaatgacatcagc
atgcgtatccgtgttgagcgtggtcgtggttatgtaccggcttctgcccgtgcacaaacc
gaagacgatgatcgcccaatcggtcgtttgctggttgatgcttcattctcacctgttgct
cgcattgcctacaatgtagaagcagctcgtgtggaacagcgtactgacttggacaagctg
atcatcgatatgaccactaacggtactatcgatcctgaagaagctatccgtcgttctgcg
actatcctggctgaacagctggatgccttcgttgaattgcgtgatgtgaccgagccagag
cagaaggaagagaaaccggagttcgatccgattctgttgcgtcctgtcgacgatttagag
ctaactgtacgttcggctaactgtttgaaagccgaagcgattcattacatcggagatctg
gtacaacgcactgaagttgagctgctcaaaacacctaacctgggtaagaaatctcttacc
gagatcaaggatgtgttggcatctcgcggactgtcgctaggtatgcgtctggaaaactgg
ccaccggctagtttggcagacgacctgtaa
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