Shewanella algae: BS332_06630
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Entry
BS332_06630 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salg
Shewanella algae
Pathway
salg03420
Nucleotide excision repair
salg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS332_06630
03430 Mismatch repair
BS332_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_06630
Enzymes [BR:
salg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS332_06630
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS332_06630
MMR (mismatch excision repair)
Other MMR factors
BS332_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_22
AAA_11
PhoH
Rad17
UvrD_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXQ14031
UniProt:
A0AAD1K6X0
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All DBs
Position
1459550..1461598
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AA seq
682 aa
AA seq
DB search
MKKELAVDFETFSQKSDTPVFHKIKFDETSIYLTKSFFYESGIPNTGKNHFGNYRLFSWS
DARAKAFLGFELGQESPALGIASVIGSFTPLKDDLRDVKYVSGEGKAYFKSALAELEGKN
IEEESSEKVDAENFMKMKEIIPTGAQGKAIYGDGDYIIDGPAGTGKSTTVLQKIKLLEVQ
EKINPTRIQVIVKNSKVVPRFKELLAAIDIFDISILPVGDFIARNYSNTPSVGVDELSFL
NKLAVNASDILNFVFDTKTLFALGYQLNQNYWDQMCEVTKNDTSFISAAKSFLEKAEEVR
ESKKVNSKSIADKQAELRKNTAIEKEKLTRAIIKKNEKSLLRRLGKRIGFNATSNESALS
LGDEANIREQLSKYKNRHQEVIEKFKLRFDEQIHLAEQSLVKELESIKEVFVKAVVKTTR
DRNEAEILRLYFNKNLFGNYPFHTIIVDEAQDVSSVDIELIRLCTQNSILAGDESQTENP
DGIGLWDNLAIENTFTKNDNLNIYQLRHNFRQTYELGNVSYNYRQLILGRGIEDIKSDYF
EDQIGFNKPSLRLISAEEDFVHLVKARIDYIKETFSSSFPLVIFYENSSSLQRFKTLLQG
ENFTICNDENLEYASDILFVNIWEIAGREFPVVLAPLTESTSANTIYIMLSRAKFDLTFF
TGAGKTIDPYILLLCQHGLINK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaattagccgtagattttgaaaccttttcacaaaaaagtgatacgcctgta
tttcataaaataaaatttgatgaaaccagtatttatctaaccaaatcatttttctatgaa
agtggtatacctaatacgggcaagaatcattttgggaactatagacttttttcttggtca
gatgctagagcaaaagcgtttcttggttttgaactaggacaagaaagcccagcgttgggt
attgcaagtgtaataggtagtttcactcccttgaaagacgatttaagagatgttaagtat
gtctctggtgagggtaaagcatactttaaaagtgcgctcgcagagctagagggcaagaat
attgaagaagaaagctccgaaaaggttgacgctgaaaacttcatgaaaatgaaggaaata
ataccaacaggagcgcaaggtaaagctatttatggcgatggcgactacattatagatggg
cctgcgggtactggtaaatcaactactgtactacaaaaaatcaagttactagaggttcaa
gaaaagataaatcctacaagaatacaagtgattgtgaaaaactctaaagtggtgcctcga
ttcaaagagttattagctgcaattgatattttcgatatttctatattgccagttggtgat
tttatcgcaagaaactattcaaatacaccaagcgtgggcgttgatgaattatcttttctt
aataaattagctgttaacgcttccgacattctcaatttcgtttttgatacgaaaactctt
tttgctttaggttatcaacttaaccaaaactattgggatcaaatgtgtgaggttacgaaa
aatgacacatcctttatttctgctgctaagagttttctagaaaaagccgaagaagtaaga
gaaagtaaaaaagttaattcaaaaagtattgctgacaagcaggctgagcttagaaaaaat
acagctattgaaaaagaaaaacttaccagagccataattaagaaaaacgaaaagtccttg
ttaagaaggttgggcaaaagaattggttttaatgcaacaagtaatgaatccgctttgtca
ttaggtgatgaggctaatattcgagagcaacttagtaaatataaaaacaggcatcaggaa
gttatagaaaaatttaagttacgtttcgatgagcagattcatttggcagaacagtcttta
gtcaaggaacttgagagtatcaaagaggtattcgttaaagctgttgtaaaaaccacaaga
gatcgaaatgaagcggaaatattaagactttacttcaataaaaatcttttcggaaattat
ccattccacacaattattgttgatgaagctcaggatgtttcatcagttgatattgagtta
ataaggctttgcacgcaaaacagtattttggctggagatgagtctcaaactgaaaaccct
gatggtattggtttgtgggacaaccttgcaattgaaaatacttttactaaaaacgataac
ctgaatatttatcaacttaggcataacttcagacaaacctatgaactagggaacgtcagt
tataattatcgtcagcttatacttgggcgaggcattgaagatataaagtcagattatttc
gaggatcaaattggctttaataagccaagcttaagacttatatcagcggaagaagacttt
gttcacttggtaaaggcccgaattgattacattaaggagacgttttccagttcatttcct
ttagttattttttatgagaattcgtcgagccttcagcgattcaaaacgctactacaaggg
gaaaatttcaccatatgcaatgatgagaacttggagtatgcaagcgatattttatttgta
aatatctgggaaatcgctgggcgagagttcccagtggttcttgcccctctgactgaatcc
actagcgctaacacaatttatattatgttgagtcgagccaaatttgatttgacgtttttc
acaggtgcgggaaaaactatagacccatacatattgctgctgtgccaacatggtttaatt
aacaaatga
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