Shewanella algae: BS332_07520
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Entry
BS332_07520 CDS
T05622
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
salg
Shewanella algae
Pathway
salg03030
DNA replication
salg03410
Base excision repair
salg03420
Nucleotide excision repair
salg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BS332_07520
03410 Base excision repair
BS332_07520
03420 Nucleotide excision repair
BS332_07520
03440 Homologous recombination
BS332_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salg03032
]
BS332_07520
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_07520
Enzymes [BR:
salg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BS332_07520
DNA replication proteins [BR:
salg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BS332_07520
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BS332_07520
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS332_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AXQ14165
LinkDB
All DBs
Position
complement(1650940..1653708)
Genome browser
AA seq
922 aa
AA seq
DB search
MPTIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLGKYKPQQMAV
VFDAKGPTFRNEMYAEYKAHRPPMPDDLRSQIAPLHAIIEALGLPLLCIPGVEADDVIGT
LASRASKEGRAILISTGDKDMAQLVDDNVTLINTMTDTIMGPEEVTSKFGVGPELIIDLL
ALMGDKADNIPGLPGVGEKTALAMLTGAGGVAKLLQQPDCVTELGFRGAKTMAKKITDNA
EMLQLSYDLATIKTDCELDLDWHQLNITEPNKDQLTQLYGEMEFKRWLAEVLDNKMPHPK
AANTTAPETQEETPSQVTIETKYETILTEAALEKWLKKLADAELMAVDTETTSLNYMDAK
LVGLSFAVKAGEAAYLPLGHDYLDAPEQLSREGVLAKLKPILEDPEIKKVGQNLKYDISI
LANAGIKLAGVAFDTMLESYVFNSVASRHDMDGLALKYLGHKCVSFEDIAGKGAKQQTFN
QIPLETAAPYAAEDADITLRLHQHLWPRLEREQELANVFTELELPLIQVLSQMERDGVLI
DSMQLSQQSDELAQKIDALEQKAYEIAGEKFNLGSPKQLQALFFEKLGYPVIKKTPKGAP
STAEEVLIELALDYPLPKIILEHRSLTKLKSTYTDKLPLMINGKTGRVHTSYHQANAATG
RLSSSDPNLQNIPIRTEEGRRIRQAFIAPSGRKILAADYSQIELRIMAHLSQDAGLLAAF
AEGKDIHRATAAEVFDVAFETVTPEQRRRAKAVNFGLIYGMSAFGLARQLDIPRTEAQSY
MDTYFKRYPGVLKYMEETRALAAEQGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP
MQGTAADIIKKAMIKVADWIASDTKGEITMIMQVHDELVFEVNEAKAEELQHQICKLMAE
AATLDVPLLAEAGLGDSWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaatagcagaaaaccccctcgtccttgtggatggttcttcctacctctatcgg
gcctactatgcaccacctcacctgaccaattccaagggtgaagctaccggggctgtttat
ggcgtagtcaatatgttgcgcagcttgctgggcaaatacaagccacaacagatggcggtt
gtttttgatgccaagggtcccacgtttcgtaacgagatgtacgccgagtataaggcccac
aggccaccaatgcctgatgatctgcgaagtcagatagcccccctgcatgccatcatcgag
gctcttggcctgccactcctttgtattcccggggttgaagccgatgacgtgataggcact
cttgcctccagggccagtaaggaaggccgtgccattctgatcagcacaggcgataaggat
atggcgcaactggtggatgacaatgtcaccctgatcaacacaatgacagacaccataatg
ggaccggaagaggtcaccagtaaatttggtgtcggccccgagcttatcatcgacctgttg
gccctgatgggcgacaaggccgataacatcccgggactgcctggtgtgggtgagaaaacc
gcgttggccatgctgacaggggccggtggtgtcgccaagctactgcagcaaccggattgt
gtcacggaacttggcttccgtggtgccaagaccatggccaagaaaatcaccgacaatgcc
gagatgctgcaactatcctacgatctggcaactatcaaaacagattgcgagctggatctg
gattggcatcaactcaatattaccgagcccaataaagaccaactgacacagctttacggc
gagatggagttcaagcgttggttggcagaagttcttgacaacaagatgccgcaccccaag
gcggccaacacaacagcgccagaaactcaggaagaaactccatctcaagtcaccatagag
acaaaatacgaaaccatactgacagaagccgcactggaaaaatggctgaaaaagctggcc
gatgccgaactgatggcggtagatactgaaaccaccagcctcaactatatggacgccaaa
ctggtgggtttgtcctttgccgtcaaggctggagaagccgcctatctgccactgggacac
gattacttggatgcccccgagcagctgtctagagaaggggtattggccaaactcaagcct
attctcgaagatcccgagataaagaaagtcggtcaaaatctgaaatatgacatcagtatt
ctggccaatgccggtatcaaactggccggtgtcgccttcgataccatgctcgaatcctat
gtattcaattctgtagcatccagacacgacatggatggcctggcgctcaagtatctgggg
cacaaatgtgtcagcttcgaagatattgccggtaaaggcgccaagcagcagacattcaac
cagatccctttggaaacagcggcgccttacgccgccgaagatgccgatatcacactcagg
ctacatcaacacctgtggccaaggcttgagcgggagcaagagttagccaacgttttcacc
gaacttgagttgccgcttattcaggtgctctcacagatggaacgcgacggagtgttgatc
gacagtatgcaactgtcgcagcagagtgatgagctggcacaaaagatagatgcgctggag
caaaaagcctatgagatagccggagagaagttcaatctgggttctcccaaacagctgcag
gcactgttcttcgaaaagctgggttatccggtgatcaagaaaactccaaaaggcgcgcca
tccaccgccgaggaggtattgatagagttggcgctggattatccattgccaaagatcatt
ctcgagcatcgcagcctgaccaagctcaagagcacttatacagataagttaccgctgatg
atcaatggcaaaaccggccgggtgcataccagctatcatcaagccaacgctgccaccggc
cgcttgtcgtccagcgaccctaacctgcagaatattcctatccgcaccgaagaggggcgc
agaattcgtcaggcctttatcgcaccttcagggcgcaagattctggccgccgactactca
cagattgagctcaggatcatggctcacctgtcccaggatgccggcctgctggcggcattc
gccgagggtaaagatattcacagagcaacggcggctgaagtctttgatgtggcttttgaa
actgtcactccagagcagcgccgacgggccaaggcggttaacttcggtcttatctatggc
atgtccgcctttggcttggcacgccaactggatattccccgcactgaagcacaaagctat
atggatacctacttcaagcgttatcccggcgtgctcaagtatatggaagagaccagggca
ctcgctgccgagcaaggttatgtctccacactctttggtcggcgcctgtatctaccggaa
atccgtgatcgcaatgccatgcggcgtcaagccgcagaacgggctgcaatcaacgctcct
atgcagggaacagcagccgacatcatcaagaaggcgatgatcaaagttgccgactggata
gcctctgataccaagggggaaatcaccatgatcatgcaggttcacgatgaattggtgttt
gaagtcaatgaagcgaaagccgaagagctgcaacaccagatctgcaaactcatggctgaa
gccgctaccctggatgtacctttgctggccgaagccggcttgggtgacagctgggatcag
gctcactga
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