Shewanella algae: BS332_08720
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Entry
BS332_08720 CDS
T05622
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salg03000
]
BS332_08720
Transcription factors [BR:
salg03000
]
Prokaryotic type
Helix-turn-helix
Other families
BS332_08720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
HTH_30
PAS_4
AAA_5
Mg_chelatase
AAA_2
HTH_20
HTH_23
HTH_7
HTH_17
HTH_29
HTH_1
HTH_22
nSTAND3
nSTAND6
PAS
HTH_28
DUF2089
AAA_3
HTH_Tnp_ISL3
Phage_NinH
HTH_Tnp_1
UBA_HOIP
HTH_11
AAA_7
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AXQ14363
LinkDB
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Position
1901148..1902950
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AA seq
600 aa
AA seq
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MTLKTHSQSWLSASWQRCQRAGLNPAAIPDELRLNTAALDERRQRHGQLLQAVEHSALSL
FNQLMGRTQSRLILSDPQGFVLHHWGVSRYSQKLANIALDTGVNWLEQYKGTNAIAAALS
ERQCVSVIGEQHFIKSHRFMSCTASPLFSPDGELLGALDITSEQQIHTPKTAILVSSLAQ
QLELALLCRLPGAAVRLDLAPQQALLHSGWQGVLVLDLDGRVLGANPMARQLLKGINLGQ
IHQALSPLVLSRGSGRLQQGLVFRTQALEQPQHTKPVVRTSQSRESQSRESSAAFKEPRL
EQAWQQARKVLARNIPLLILGETGVGKEQFVKQLHVQSARHQQPFVAVNCAAIPGELVES
ELFGYQAGAFTGASRQGYVGKIRQAHQGSLFLDEIGEMSLAAQSRLLRVLQEREVVPIGS
NQAHSVDIQVIAATHMDLPALVQQGAFRADLYYRLNGLQVTLPALRQRSDLRRLIHKLHQ
RYRVRPQSLCPVLEQRLLQYHWPGNLRELDNLMQVACLMAEESPELNWQTLPESLQQTLG
TAEEAMAGVAPAPGNNLHSQMQMQIRDTWLACNGNVSEAARRLGISRNTLYRKLKALALK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagacccattcccaatcctggttatcggcttcctggcaacgttgccagagg
gctgggctcaatcccgccgccatacccgatgaactcaggctcaatactgcagcccttgat
gagcggcgccagcgccatggccagctgctgcaagccgtggagcacagtgcactgtcactg
ttcaatcaacttatggggcgaacccagagccggctcatcctctcggatcctcaaggtttt
gtgctgcatcactggggtgtgagccgctactcacaaaagcttgccaatattgccctggat
accggggtcaactggctggagcaatacaagggaaccaatgccatagccgcggcactcagc
gaacgccagtgtgtttcggttatcggtgagcagcactttatcaagagccacagatttatg
agttgcaccgccagcccgctgttttccccggacggtgagttgctgggagccttggatatc
accagtgagcagcaaatccataccccaaagacagccatcttggtgtccagtttggcgcag
cagttggagctggccttattgtgccgactccccggcgctgctgttcgattggatctggcg
ccgcagcaggccctgttgcattcaggctggcaaggcgtattggtgctcgaccttgatgga
cgggtgctgggcgccaaccctatggcaaggcagttgctcaaaggcatcaacctgggccaa
attcatcaggccttgtcccctctggtattgagtcggggcagcggccgcttgcagcaggga
ttggtgttcagaacccaggcgttggagcagcctcaacataccaagcctgtggttcgaacg
agccagagccgagaaagccagagcagagaaagcagcgcagcttttaaagaacccaggttg
gagcaagcctggcagcaggcgcgtaaggtgttggcacgaaatatccctttgctgatcctt
ggggaaaccggagtgggcaaggagcagtttgtcaaacagctgcatgtgcaaagtgccagg
catcagcagccttttgtggcggtcaactgcgccgcgatcccgggggagctggtggaatca
gagctgtttggttatcaggcgggtgcctttaccggagcttccaggcagggatatgtcggc
aaaatacgtcaggcgcaccagggatccctgtttctggatgaaataggcgagatgtcccta
gcggcccagagccgtttgcttagggtgttgcaggagcgcgaggtggtgcccattggcagt
aatcaggcacacagcgtcgacattcaggtgattgccgccactcatatggacttaccagca
ttggtgcagcagggggcctttcgcgccgatctctattaccggctcaatggcttgcaggtc
acactgcctgcattgcgccagcgaagcgacctacggcgtctgatccacaaattgcaccag
cgctatcgagttcggccccagagcctgtgtcctgtgctggagcagcgattgctgcaatat
cattggccgggaaacctacgggagctggataacctgatgcaggtagcctgtttgatggcc
gaagagtcccctgaacttaactggcaaacgctgcctgagagcctgcagcagaccttgggt
actgcagaagaggcgatggccggcgtggcacccgcgccgggcaacaatctgcacagccaa
atgcagatgcaaattcgcgacacctggctggcctgcaatggtaacgtcagtgaagcggca
cgccgtttggggattagtcgcaacaccctataccgtaagcttaaggcgttggcgctgaag
tag
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