Shewanella algae: BS332_09745
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Entry
BS332_09745 CDS
T05622
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salg
Shewanella algae
Pathway
salg03420
Nucleotide excision repair
salg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS332_09745
03430 Mismatch repair
BS332_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_09745
Enzymes [BR:
salg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS332_09745
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS332_09745
MMR (mismatch excision repair)
Other MMR factors
BS332_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXQ14526
UniProt:
A0A2T3GXS9
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All DBs
Position
2136219..2138384
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AA seq
721 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLLQVENQSPYSIMAV
TFTNKAAAEMRERVEKIVGNHMGRMWIGTFHGLAHRLLRTHWQDAGLPQNFQILDSDDQL
RLLKRILKSLNLDEKQYPPRMVAGYINGKKDEGLRPKHLDGGLFPMEQKLVQIYQVYQES
CDRAGLVDFAEILLRAHELFLNKEHILAHYQDRFRNILVDEFQDTNAIQYAWIRVLAGKS
ANVMIVGDDDQSIYGWRGAQVENLHKFLQDFPNAETIRLEQNYRSSGNILKASNELIANN
PDRLGKQLWTEDVDGEPISVYCAFNEMDEARFIIGRIGDWQDKGGSLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYLRLIANRDDDAAFERVVNTPARGIGD
RTLDILRTTARQQQLTLWQACVRLLEEKVLAGRAANAVRSFMDLIVQLRSDTEELPLYRQ
ADIVIQDSGLKAMYEQEKGEKAQARVENLEELVTAARTFEVPEELVDMGELNAFLSHAAL
EAGEGQADAHTDAVQLMTLHSAKGLEFPLVFMAGVEEGLFPSQLSLEEGDRLEEERRLCY
VGMTRAMQQLYITYAESRRIYGRENYSRPSRFIKEIPPQYLQEIRLKAQVATPMANNRFS
KSQSSFNDTGFNVGQRVLHPKFGEGIVTNFEGQGAQARVQVNFDDFGSKWLVVAYAKLTA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttattggatggcctgaatgacaagcagcgtgaggcggtagccgca
cctcaatccagcatgctggtgctcgccggtgccggcagcggcaagacccgggtactgact
cacaggattgcctggctgctgcaggtggaaaaccagagcccatactccattatggcggtg
acctttaccaataaggcggccgctgagatgcgggaacgggtggagaagatagtcggcaac
catatgggccgcatgtggatcggtaccttccatggtctggcccatcgtctgctgcgtact
cactggcaggatgccggcctgccgcaaaattttcagatcctcgactcggatgatcaactg
cggctgctcaagcgcatcctcaaaagcctgaatctggatgagaaacagtatccgccgcgt
atggtggccggctatatcaacggcaagaaggatgaagggctaaggccgaaacatctggat
ggcggcctcttccccatggagcagaaactggtacaaatctatcaggtgtatcaggagtcc
tgtgatcgcgccgggctggtagactttgccgagatactcttgcgggctcacgagctgttt
ctcaacaaggaacatattctggcccactatcaggacaggttccgcaatattctggtggat
gagtttcaggataccaacgccattcaatatgcctggatcagagtattggcaggcaagagc
gccaatgtgatgatagtgggcgacgatgaccagtccatctatggctggcgtggcgcccaa
gtggaaaacctgcacaagtttttacaggattttcccaatgccgaaactattcgcctggag
caaaactaccgctccagtggcaatattctcaaggcctccaacgaacttatcgccaacaac
ccggatcggctgggtaaacagctatggaccgaagatgtcgatggtgagccgatctcagtt
tactgtgccttcaatgagatggatgaagcccgcttcatcataggccgcattggcgactgg
caggacaagggcggcagtctcagtgactgcgccatcctctatcgcagtaatgctcaatca
cgggtattggaagaggccttgctgcacaaggggctggcctatcgcatctatggcggcttg
cgcttcttcgagcgtcaggagatcaaggatgccatgggatacctgcgtctgattgccaac
cgcgacgatgacgccgccttcgagcgggtggtcaacactcccgccagaggcataggcgat
cgcaccctggatattctcagaaccacggcccggcagcagcaattgaccctgtggcaggcc
tgcgtccgtttgttggaagagaaggtcttggccggccgcgccgccaatgcggtgcgcagc
tttatggacttgatagtgcagctacgcagcgacaccgaagagctgcccctctatcgccag
gcggatatagtgatccaggactccgggctcaaggccatgtatgagcaggaaaagggcgaa
aaggctcaggccagagtggaaaacctcgaggaactggtcaccgcggcgcgcaccttcgaa
gtgccggaagagctggtggacatgggtgagttgaatgccttcctgtcccatgcggcgctg
gaggcgggagaaggccaggccgatgcccacacagatgcggtgcagttgatgacgctgcac
tcggccaaggggctggagttcccgctggtgtttatggccggtgttgaagaagggctgttc
cccagccagttgtcgctggaagagggcgatcgtttggaagaagagcggcgcctgtgttac
gtgggtatgacccgcgccatgcaacagctgtatatcacctatgccgagtcacgccgcatc
tatggccgtgaaaactactcgcggccgtcgcgttttatcaaggagatcccgcctcagtac
ctgcaggagatccgcctcaaggcgcaggtggcaactcccatggccaacaacaggttcagc
aagtcgcaaagcagcttcaacgacacgggcttcaatgttggccaacgggtgctgcacccc
aaattcggtgaggggatagtgaccaattttgaaggccagggagcacaggccagggtgcag
gtgaatttcgatgacttcggcagcaagtggttggtggtggcctacgccaagttaactgct
tgttga
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