Shewanella algae: BS332_09805
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Entry
BS332_09805 CDS
T05622
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
salg
Shewanella algae
Pathway
salg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BS332_09805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_09805
Enzymes [BR:
salg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS332_09805
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BS332_09805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
WHD_PriA
AAA_30
DUF5816
iSirtuin
TrwB_AAD_bind
Zn_ribbon_6
AAA_19
DUF2321
Motif
Other DBs
NCBI-ProteinID:
AXQ14537
LinkDB
All DBs
Position
complement(2149810..2152005)
Genome browser
AA seq
731 aa
AA seq
DB search
MPQFVEVALPVPMRQNFSYLMPKACPWPLEPGMRVRVPFGRQQLIGLVTGLSDECELEPK
QLKPVYQVLDSAPLLPPALYQLTLWAARYYFCSQGQMLTQALPVALRKGADAAPEKISYL
CLTSAGQEATLESLKRAPAQRKLLQQLKQGELTTEEVNALELSKSAIKGLLDKGWAEQRE
RSVSANLEWRQKLELGEEPHRLNPEQAVAVASLNAQSGYQCSLLEGITGSGKTEVYLAVL
ETILKAGKQALILVPEIGLTPQTINRFKRRFKVTVAVIHSGLTDKQRLDAWRLARSGEAA
IIIGTRSALFTPMAWPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEQVPVLLGSAT
PSLESLQNALSGRYQHLQLGERAGNALKVRQGLIDIRNQPLQAGMSQALLNEMRLHLQAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTLHQSLGEIRCHHCGNQYAIPRQCHN
CGSTMLQGQGIGTEQLEAALSKEFPEYPVVRIDRDTTSRKGSLEQHLSAIHRGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPLLRDLMHRGYGEFARSQLNERQQALLPPAWHMVLIRAESHRAEDADAFLAAFAA
MLPMDKDFEVIGPLPAPLDRKAGKYRRQLLAQAKDRRRLQQVFEQLLLQAEQLPEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagtttgtagaagttgcccttcccgttcccatgcggcagaacttcagttacctg
atgcccaaagcttgcccctggccactcgagccgggaatgcgggtgcgcgtgccctttggc
cgccagcaactcataggcctggtgacaggcctgagtgatgagtgcgaactcgagcccaaa
caactcaagccggtatatcaagtgctggacagcgcgccattgctgccaccggcgctgtac
caactgaccctttgggccgccagatactatttctgcagccaggggcagatgttgacccag
gccctgccggtggcgctgcgcaagggtgccgatgccgcaccggagaaaatcagttatctg
tgtctgaccagtgcgggccaggaggccacactggagtcgctgaaacgcgctcccgcccaa
cgcaaactgctgcaacagctcaaacagggggaactgaccactgaagaggtcaatgcgctg
gagctgagcaagagtgccatcaaggggctgctggacaagggctgggccgagcaacgagag
cggtcagtcagtgccaatcttgaatggcggcaaaagcttgaactgggggaagaacctcac
aggctcaacccggagcaagccgtggcggtcgccagcctcaatgcccaaagcggctatcag
tgcagcttgcttgaagggatcacaggctcaggcaagacagaggtctatctggcggtactg
gaaaccatactcaaggctggcaagcaggcgctgatcctggtgccggaaatcggcctgacg
ccgcaaaccatcaacagattcaaacgcagattcaaagtcacggttgccgtgatccattcc
ggcctgaccgacaagcagcgcctcgacgcctggcgcctggcccgcagtggcgaggcggct
atcataatcggcacccgctcggcgctgttcactcccatggcctggcccgggatcatcatt
ctcgatgaggaacacgacagcagtttcaaacagcaggaaggcgtgggttatcacgcccgg
gatctggccgtcatgcgcggccatctggagcaggttcctgtactgctgggcagcgcgaca
ccgtcgctggagagcctgcaaaacgccctcagcggccgctatcaacatctgcaattggga
gagcgggcaggcaatgccctcaaggtgcgccagggactgatagatatccgcaaccaacca
ctgcaggcgggcatgtcacaagcgctgctgaacgagatgcgcctgcatctgcaggccggc
aaccaggtgttgctgtttctcaatcgccgcggctttgcccctgccctgctgtgccacgaa
tgtggccatctgcacgagtgcgatcgctgtgatgcgtttttcaccctgcaccaatccctc
ggcgaaattcgctgccaccactgcggcaaccagtatgcaattccacgccagtgccacaac
tgcggcagcaccatgttgcagggtcagggtataggcacggagcaattggaggcggcgctc
agcaaggagtttcccgagtatcccgtggtgcgaatcgaccgggataccaccagccgcaaa
ggctcgctggaacagcacttaagcgccattcatcgcggcgaatacaagatattggtaggc
acccagatgctggccaagggacatcactttcccgatgtcaccctagtggggctgctcgat
gtagatggcgccctgttcagcgcggactttcgggcccctgagcgcttcggccagctctat
acccaggtggccggtcgcgccggccgcgccagcaagccgggcactgtgctgctacagacc
catcagagcgacaaccctttgctcagggatctgatgcacagaggctatggcgagtttgcc
cgcagccagctcaatgaacgccagcaggcactgttgccaccggcctggcatatggtactg
atccgcgccgaatcccaccgcgccgaggatgccgatgcctttctggcagccttcgccgcc
atgttacccatggacaaggattttgaagtgataggcccgctgccggcgccgctggatcgc
aaggccggcaagtatcggcgccagttgttggctcaggccaaagacagacgcaggctgcaa
caggtgtttgaacagctgttgctccaggccgaacaactgcccgaggccaagcgctgccgc
tggagtctggatcgagatcctcaggatctgctgtaa
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