KEGG   Shewanella algae: BS332_10165
Entry
BS332_10165       CDS       T05622                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
salg  Shewanella algae
Brite
KEGG Orthology (KO) [BR:salg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salg03032]
    BS332_10165
   03036 Chromosome and associated proteins [BR:salg03036]
    BS332_10165
   03400 DNA repair and recombination proteins [BR:salg03400]
    BS332_10165
DNA replication proteins [BR:salg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BS332_10165
Chromosome and associated proteins [BR:salg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BS332_10165
DNA repair and recombination proteins [BR:salg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BS332_10165
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF3791 TFIIB HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AXQ14601
UniProt: A0A2T3H7K6
LinkDB
Position
complement(2230232..2230504)
AA seq 90 aa
MNKTELIAKMAEHANLSKAEAARALKSFEVAVTDAMKEGTKISIVGFGSFETSTRAARTG
RNPQTGKEIQIPAATIPKFKAGKALRDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaactgaactgatcgctaaaatggcagaacacgccaacctgtccaaggcagaa
gctgcccgcgcactcaagtcgttcgaagtagcagtgaccgatgccatgaaagaaggaact
aaaatctccatcgtaggctttggctctttcgaaacttcaacccgtgcagcccgcactggt
cgtaacccgcaaaccggtaaagagatccaaatccctgccgccactattcccaagttcaag
gccggcaaggcactgcgtgacagcgtcaactaa

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