Shewanella algae: BS332_11535
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Entry
BS332_11535 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salg03000
]
BS332_11535
Transcription factors [BR:
salg03000
]
Prokaryotic type
Helix-turn-helix
Other families
BS332_11535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
AAA
AAA_16
GAF
GAF_2
AAA_19
Torsin
DUF5624
TIP49
Motif
Other DBs
NCBI-ProteinID:
AXQ14830
LinkDB
All DBs
Position
2541832..2543388
Genome browser
AA seq
518 aa
AA seq
DB search
MVTEQWLEQAAKLLECQQFDGLLQQFLDTLALELGLDNHLFLAPGFDGRELKPLSCLGLC
EGISLQALCLAVTDFRHPFAHVLQTGEAMLLNKARLAYWQEHSGFVSLCDRVGKEQALLL
FPLSHEGHVRAILCLRLAEQQGSGLLVRQDWQQYAAVFMRHWQLLDKLLRQNSDQSQLSS
SLDELRRQQQQHDAMQQLGKNLVGDSQAMSQLRQEIVRGAASQLSVLVQGETGTGKELVA
RAIHDFSERSGKPFVAINCAAIPENLLESELFGYAKGAFSGADKDKQGLIAQAHQGTLFL
DEIGDMPLNLQSKLLRVLETGHYRALGGNKEIYADFRLVAATHVNLKEQIHSGEFRRDLF
YRLCQFPLQVPALRERLEDIPDLAAHFIALFNQSQQRQIPGIRFSALNRLKNHGYPGNVR
ELRNMLDYACALTADGVEIDTASLPATDSEMPKPQLPTEEGQEFEAISDLRLAVAQFERA
VISARLKACNGDRAKAAVSLGMPKRTFSHKCQKLEINE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtggtgactgagcagtggttggaacaggcggcaaaattgctggaatgccagcagtttgat
gggctgttgcagcagtttctcgatactttggcattggagctggggctggataaccatctg
tttctggcgccgggcttcgatggtcgggaactcaagccactgtcctgccttggcctgtgt
gaagggatctcattgcaggcgctttgtttggcggttaccgactttcgtcatccgttcgcc
catgtgttgcagacaggcgaagccatgctgctgaacaaggcccggctcgcctactggcag
gagcacagcggttttgtcagcctgtgcgatcgggtcggcaaggagcaggcactgctgctt
ttcccgctgagccatgagggtcatgtgcgggctatcctctgcctgcgtctggccgagcaa
cagggcagtggtctgcttgtccgtcaggactggcagcaatatgccgccgtctttatgcgc
cactggcagttgctggataagttgttgcggcagaattcagatcagtctcagctgtcgagc
tcgctcgatgaactgcgtcgccagcagcaacaacatgatgccatgcaacaacttggcaag
aacctggtgggcgacagtcaggccatgagtcagctcaggcaggagatagtgcgcggcgcg
gcctcacagttgtctgtgttggtgcagggcgaaacgggtacggggaaagaactggtggcc
cgggcgatacacgacttttccgagcgcagcggcaaacctttcgtggcaatcaactgcgct
gcaataccggaaaacctgctggagtccgagctgttcggttatgccaagggggccttttcc
ggtgccgacaaggataagcaggggctgatagcccaggcgcaccagggcacgctgttttta
gatgaaatcggtgatatgcctttgaatctgcagtccaagttactgcgggtactggaaaca
gggcactaccgggcactgggaggcaacaaggagatctacgccgattttcgcttggtggcc
gctacccatgtgaacctcaaggagcagatccacagtggcgagttccgtcgcgatctcttc
taccgcttgtgccagtttccactgcaggtaccggcgctcagggagcggctcgaggatatc
cccgatttggcggcgcactttattgcactgttcaatcagagtcagcagcgacagatcccc
ggcatccgcttcagcgccctcaatcggctgaagaaccacggctacccgggtaatgtccgc
gagctgcgcaatatgctggattatgcctgcgccctcacagccgacggtgtcgagatagat
actgcgtctttgccggcgacggattcggaaatgcccaagccgcaattgcctaccgaagag
gggcaggagtttgaggccatttccgatctcaggctggcggtagctcagtttgagcgggcg
gtgatcagcgccagattgaaggcctgcaacggtgacagagccaaggcggccgtcagtctg
ggaatgccgaaacgcaccttttcccacaaatgccagaagttggagattaacgaataa
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