Shewanella algae: BS332_11790
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Entry
BS332_11790 CDS
T05622
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
salg
Shewanella algae
Pathway
salg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS332_11790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_11790
Enzymes [BR:
salg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BS332_11790
DNA repair and recombination proteins [BR:
salg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BS332_11790
Prokaryotic type
BS332_11790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
REPA_OB_2
Motif
Other DBs
NCBI-ProteinID:
AXQ14874
LinkDB
All DBs
Position
2601612..2602280
Genome browser
AA seq
222 aa
AA seq
DB search
MALPTDWQAFIAAEQQAPYFQQLSEFVAAERAAGKGIFPPEDEVFSAFELTPLDKVRVVL
IGQDPYHGPGQAHGLCFSVKPGVKTPPSLVNMYKELATDIPGFSIPDHGNLLSWAKQGVL
MLNTVLTVEQGKAHSHAKAGWETFTDRALQLLDQREEPIIFVLWGSHAIKKGKLIKAPQH
KILSGPHPSPLSAYRGFFGCGHFSAINQQLKQWQQAEIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcgctccccactgactggcaggcatttatcgccgctgaacaacaggccccttacttc
cagcaactcagtgagtttgttgccgcggagcgcgccgccggcaagggtatctttcctcct
gaggacgaggtattcagtgcctttgagctgacaccactggacaaggtgagagtggtactt
ataggtcaggacccttaccatggcccaggtcaggcccatggcctgtgtttctcggttaaa
cccggggtgaagacgccaccttcgctggtcaatatgtataaggaactggcgaccgacatc
ccaggattctcaatcccggatcatggcaatctgctgagctgggccaagcaaggagtcttg
atgctcaacactgtgctgacggtggagcagggcaaggcgcactcccatgccaaggcgggc
tgggaaaccttcaccgacagggcgctgcaactgctggatcagcgtgaagagccgattatt
tttgtcctctggggcagccatgccattaagaaaggcaagcttatcaaggcgccgcagcac
aaaatcttaagcggcccgcatccttcgcctctgtcagcctatcgcggcttctttggctgt
ggccatttctcggccatcaatcagcagttgaaacagtggcagcaagccgaaatagattgg
caggtttag
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