Shewanella algae: BS332_12080
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Entry
BS332_12080 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salg03009
]
BS332_12080
Enzymes [BR:
salg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BS332_12080
Ribosome biogenesis [BR:
salg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BS332_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXQ14924
LinkDB
All DBs
Position
complement(2658779..2659492)
Genome browser
AA seq
237 aa
AA seq
DB search
MRLAHYLAQSGLCSRREAARRIEAGEIFKGDRPAKHTDRVTLAAGQRHCLEKLFYLGEPV
AAPAPYAYLLFNKPVGIDCRLLKDDPSSLSHLLPQDKRLYPAGRLDKDSRGLLLLSNDGE
LTQQLMHPDFCHSKHYRVTLERAFTDAFIHALRNPMDYGYGQVRASQVTPISANSFEIIL
TQGKKRQIRRMCRHLGYRVTDLCRTRIMELTLDRLAEGEFRELSRAQIAALKVSLQR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgcccactatctggcgcaatccggtctgtgctcaagacgcgaagccgccaga
cgcatcgaagccggagagatttttaagggtgacaggccagccaaacacacagacagagtc
accctcgccgccgggcagcgccattgtcttgagaagttgttttatctgggcgagcccgtc
gccgccccggcaccttacgcttatctgctattcaataaacccgtcgggatagattgccgc
ctgctcaaggatgacccgagcagcctatcgcatttattgccccaggataaacgcctgtat
ccggccggaaggctggataaagactcccgcggcctgttgctgctcagcaacgacggcgaa
ctgacccagcaactgatgcatccggatttttgccacagcaaacactaccgggtcactctg
gagcgggcatttactgacgcgtttatccatgccttgagaaacccaatggattacgggtat
ggccaggtgcgggcatcacaagtcacgccaatttcggcaaacagttttgaaatcattctg
actcagggcaagaagcggcaaattcgccgtatgtgtcggcatttgggctacagagtcaca
gatctctgccgtacccggataatggagttaacacttgataggcttgctgaaggggagttt
agagagctcagccgtgcacaaatcgccgcgctcaaagtgtcacttcaacgctga
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