Shewanella algae: BS332_13050
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Entry
BS332_13050 CDS
T05622
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salg03016
]
BS332_13050
Enzymes [BR:
salg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BS332_13050
Transfer RNA biogenesis [BR:
salg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BS332_13050
Prokaryotic type
BS332_13050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AXQ15080
LinkDB
All DBs
Position
2866503..2867450
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AA seq
315 aa
AA seq
DB search
MARRPKGRLVDGIVLLDKDTGMSSNFALQRVKRIYNAAKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRPVEFSMTQLEVALEHFRGDSMQ
VPSMYSALKYQGQPLYKYAREGKEVPREARPIHVYELKFISLENDELTLDIHCSKGTYIR
TIVDDLGEMLGCGAHVIMLRRTQVAGYPYERMVSLAQLEALLEQAMTEERVPSELLDPLL
LPMDTAVADLPECNVPDAMAGYLLNGNPVRVAKLEADTLVRITLGESKRFIGVGMMNDDG
LLAPKRLVVLPEAKS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcccaaaggccgtttggtcgatggtatcgtcctgttggataaagacact
ggcatgagttccaactttgccctgcaaagggtaaagcggatctacaacgccgccaaggcc
ggccataccggcgcgttggatcctctggcgacaggtatgctgcccatctgtcttggcgaa
gccaccaagttttcccagcacctgttggatgccgataaacgctatctggtgacagccaag
cttggagagcgcactgataccagcgattctgacggtgaagtggtacaaacccggccggtt
gagttttccatgactcaactggaagtggcgctggagcattttcgcggcgatagcatgcag
gtgccttccatgtactcggcgctcaagtatcagggtcaacccttgtacaagtacgcccgg
gaaggcaaggaagtgccccgcgaagccaggcctattcatgtctatgagctcaagttcatc
tctttggagaatgacgagctgacgctggatattcactgctccaagggtacgtatattcgc
actatcgtagacgacttgggcgaaatgcttggctgcggtgcccatgtgatcatgttgcgc
cgcactcaggtggcgggttatccctatgagcggatggttagtctggcacagcttgaagcc
ttgctggaacaggccatgaccgaagagcgggtgccttccgagctgttggatcctttgctg
cttcccatggacactgcggttgccgaccttcccgagtgcaatgttcccgatgccatggcc
ggatatctgctcaacggtaacccggtgcgggtcgccaagctggaagccgataccctggtg
cggatcaccctgggtgaaagcaagcgctttatcggtgttggtatgatgaatgacgatggt
ttgttggctcccaagcgtttggtagtgttgcctgaggcaaaaagctga
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