Shewanella algae: BS332_13420
Help
Entry
BS332_13420 CDS
T05622
Name
(GenBank) GGDEF domain-containing protein
Organism
salg
Shewanella algae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
5TM-5TMR_LYT
PAS
PAS_4
PAS_8
PAS_11
Diguanyl_cycl_sensor
TIC20
Cpta_toxin
Motif
Other DBs
NCBI-ProteinID:
AXQ15140
LinkDB
All DBs
Position
2948992..2952045
Genome browser
AA seq
1017 aa
AA seq
DB search
MEQSIFLPLAQNAAFLLALVFMYDAIPRQQQREYFLLWRLLIGVIIGGICIAVMLTPWSY
EPGIFFDSRSVLLSISGLFFGGLPTIIACVITAAFRIYLGGGAVWIGVGVIFSSGLIGLL
WRKRRKQSLADIGYPELAGFSLLVHLVMLAWMLLLPWETAKGVLASISLPLLTLFPLTNV
LLGRLLSRRLEFERDNRIRLQDDFLFRSQFHVGNIGISITSPDQRWLKINPHMCRMLGYT
EQELSQLTWSELTHPDDLPADMAQFRRMLDGEIDEYEMEKRFVSKQGQYVYTHMTVACQR
HHQQVQLVIAGYIDITSAKLAEQAIAASRDQLELVLQSGQLGFWDWDPVKDTVVRNKRSA
EILGCSLNNLNDNKRLWLDGIHPKDRAWVLRSLDEHLADKTEQHKVQYRLIRPDGELRWV
QDTGKVVSRDEKGRPLRVCGVHVDITEQKQLEASLKLAASVYENSSEAMSVLDDVGTIMT
VNSAFSAITGYQPQDVLGSNIDMLKCDDHDERFYRELNHDLSHKGRWQGEMWLRCSDGRK
IMIWLSINTIHSTDDTPLRRVALFSDITDKKQNERLIWRQANYDALTGLPNRRMFTEHLG
NEIRKAKRHGHGFALLFLDLDFFKEVNDTLGHDMGDLLLVETSERLQACVRESDVVARLG
GDEFTLLLSDVQDHNGVERVANHILSSLAEPFKLGDETAFISASIGITLYPDDGQTVELL
LKHADQAMYAAKDQGRNRFNYFTASMQEYARYRMRLIQDLRQALERREFELRFQPIVELG
SGKVFKAEALLRWNHSERGSVSPAEFIPVAEDTGLIFEIGNWVFEQAARQSAAWREAYGS
EVQISINKSPIQFRDEGNRFAEWLELLTSLGVSGSGICIEITEGLLLDANMGVTEKLLAY
RDAGIQVSLDDFGTGYSSLAYLKRFDIDYLKIDQSFTRNLETDESDLTLCEAIIVMAHKL
GMKVIAEGVETAGQAEILTRIGCDYAQGYLYSQALDIEGFEQKYLGKHQVIGGGNAS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagcattttccttcctttggcacaaaatgccgcatttttgctggcattggtg
tttatgtatgatgctattcccagacagcagcagcgggagtacttcctgctgtggcgtttg
ttgattggcgtcattatcggtggcatctgtattgcggtgatgcttaccccctggagctat
gagccggggatattcttcgatagtcgctccgtacttttaagtatctcaggcctgtttttc
ggcggcctgccgaccataatcgcctgcgtgattaccgccgcttttcgcatctatctcggt
ggcggtgctgtttggattggtgttggagtgatcttctccagcggcttgataggcctgttg
tggcgcaaacggcgcaagcaatccctcgccgatataggctacccggagctggccggcttt
tccctgttggtgcatctggttatgctggcctggatgttactgctgccctgggaaaccgcc
aaaggggtgcttgccagtatcagtttgcctctgttgaccttgttcccactcaccaatgtg
ttgctggggcgcttgctgtcgcggcggctggaatttgagcgcgacaaccgcattcggctg
caggatgactttctgtttcgctcccagttccatgtgggcaacatagggatttccatcacc
tcgccggatcaacgctggctcaagataaacccccacatgtgccggatgttgggttacaca
gagcaggagttgtcgcaactgacctggtctgagctgacccacccggatgatctgcccgcc
gacatggcgcaattcaggcggatgctggatggtgaaatcgacgaatatgagatggaaaaa
cgcttcgtctccaagcaggggcagtatgtctatacccatatgactgtggcctgtcagcgc
catcatcagcaggtacagttggtgatagccggctatatcgatattacctcggccaagttg
gccgagcaggcgattgccgccagtcgcgatcagttggagctggtgctgcaaagcggtcaa
ctcggtttctgggactgggacccagtcaaggataccgtagtgcgcaacaaacgcagcgcc
gaaattcttggctgttcccttaacaatctcaacgacaacaaacgcctgtggctcgatggt
attcatcccaaggacagggcctgggtactgcgctccttggatgagcatctggcggacaaa
accgagcaacacaaggtgcagtaccggctgatccgtccggacggcgaactgcgctgggtg
caggataccggcaaggtcgtcagtcgtgacgagaagggcagaccgctcagggtttgcggc
gtgcatgtggatattaccgagcaaaaacagctggaagcctcccttaagcttgcggcttcc
gtctatgaaaattccagcgaggcgatgagcgtgctggatgatgtcggcaccataatgacg
gtcaattcggcgttcagcgccatcactgggtatcagccacaagatgtgctgggcagtaac
atagatatgctcaagtgcgacgaccatgatgagaggttttaccgtgagctgaatcatgat
ctcagccacaaggggcgctggcagggagagatgtggctgcgctgcagtgatggccgcaag
ataatgatttggctcagcatcaataccattcacagcacggatgatacccctctgagaagg
gtggcgctgttttccgatatcaccgacaagaagcagaatgaacgtcttatctggcgtcag
gccaactatgatgccctgactggtttgccaaaccggcgcatgttcaccgagcatcttggc
aatgaaatccgtaaggccaagcgccatggccatggttttgcgctgctgtttctggatctg
gatttcttcaaagaggtcaatgataccctcggtcatgacatgggtgacttactgctggtg
gaaacctcggagcggctgcaggcctgtgtgcgtgagtccgacgtggtggccagactcggc
ggcgatgagttcaccttgctgctctcggatgtgcaggatcataacggggtcgagcgggtt
gccaaccatattctcagcagtctggccgagcccttcaagttgggcgatgaaaccgccttt
atcagcgccagtatcggcattaccctgtatcccgatgatggccagacagtggagttgttg
cttaaacatgcggatcaggctatgtatgccgccaaagatcagggccgcaaccgcttcaac
tatttcactgcctctatgcaggaatacgccagatacaggatgcgacttattcaggatttg
cgtcaggcattggagcggcgcgaattcgaactcaggttccaacccatagtcgagctgggc
agcggtaaggtgttcaaggccgaagccttgctgcgctggaatcacagtgagcgcggcagt
gtctcgccggctgagttcattccggtggcagaagacacaggacttatctttgaaatcggt
aactgggtgtttgagcaggcggcgcgtcagagtgccgcctggcgcgaggcttatgggagc
gaggtgcagatcagtatcaacaagtcgccaatccagtttcgcgacgaaggcaaccgcttt
gccgagtggctggagctgctgacaagtctgggtgtctctggctcggggatctgtatagag
ataactgaaggcctgttgctggatgccaatatgggagtgaccgaaaagctgttggcctat
agggatgccggcattcaggtgtctctggatgactttggcaccggctattcctccctggct
tatctgaagcggtttgatatcgactatctcaagatagatcaatcttttacccgtaatttg
gaaacagatgagagtgacttgaccctctgtgaagccatcatagtcatggcacacaagttg
gggatgaaggtgatagccgaaggggtggagacagccggtcaggccgagatcttgacccgc
ataggctgcgactatgcccagggttacctctactcccaggcgttggatatcgaaggcttt
gagcaaaaatatcttggcaagcatcaggtcataggtggtggaaatgccagctga
DBGET
integrated database retrieval system
