Shewanella algae: BS332_14500
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Entry
BS332_14500 CDS
T05622
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
salg
Shewanella algae
Pathway
salg02020
Two-component system
salg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BS332_14500
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BS332_14500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salg03021
]
BS332_14500
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
salg02035
]
BS332_14500
Transcription machinery [BR:
salg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BS332_14500
Bacterial motility proteins [BR:
salg02035
]
Flagellar system
Flagellar assembly proteins
Stator
BS332_14500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
CT_C_D
Phage_terminase
GerE
Motif
Other DBs
NCBI-ProteinID:
AXQ15312
UniProt:
A0A379YJ68
LinkDB
All DBs
Position
3186233..3186952
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAAAYSGLNDKTQIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GSKGAKFETFAGIRIRGAMIDEIRRGDWVPRSVHRNNRRVAQVMDELEQELGRDARDSEI
AERLDMSLDEYHHILNDVSTGKIIGIEDLGVAPDVLVSEDMPADDTFEDLAQSQFQSALT
DAIKRLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQIHSQAMLRLKAKLKHWTQA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcggctgcatactcaggtttaaacgataagacacagatcgttgagcaatat
gcaccgttggtaaaacgaatagcccatcacctgctcgcgcgtctgcctgcatcggttcag
ctcgatgacctgctgcaggccggcatgatgggactgctggaagcttcatccaaatttgat
ggcagcaaaggtgccaagtttgaaacctttgccgggatccgcatacgtggcgccatgata
gatgaaatacgccgtggcgactgggtgccacgctcggttcatcgcaacaaccggcgtgta
gctcaggtaatggatgaactcgaacaagagctgggccgggatgcccgtgatagtgaaatt
gccgagcgactggatatgtcgctggatgaataccatcatattctcaatgatgtttctacc
ggcaaaatcatagggatagaagacctgggggtagcgcccgatgtactggtgtcggaagat
atgccggccgacgacacttttgaggatctggcccaaagccaattccaatcagccttgacc
gatgcaattaagcgcttgccagagcgcgatgccttggttttgtcgctatattatgatgaa
gcactgaatttaaaagagattggtgccattcttgaggtaagtgagtcccgggtgagccag
atccatagtcaggccatgctgaggctgaaagccaaactcaagcactggacacaagcgtaa
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