Shewanella algae: BS332_15495
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Entry
BS332_15495 CDS
T05622
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salg03000
]
BS332_15495
Transcription factors [BR:
salg03000
]
Prokaryotic type
Helix-turn-helix
Other families
BS332_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AXQ15468
LinkDB
All DBs
Position
complement(3410353..3411501)
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AA seq
382 aa
AA seq
DB search
MYFLDAATAQQIVDRTMNIIDHNINVMNSQGVILGSGDKQRLNSVHEGALLAIAQNRTVV
IDEGSRHSLHGVKPGVNLPLHYHGKIIGVVGITGNPAELLHYGELLKMTAEMMVEQANSL
ELDLWHKRQREEFILQLLKRDNYSESDFCAWAAQLQIDLQKPRVAAVIELAKGENKATDL
KEIQRLLEYPQRDNLVAMTAMDQLVILKPAFLDGRSWDPALEDLRIEKLLARLPADTQGR
LKIALGHFFPGEGGIRRSFHTALETLRLGKKRAPEKTKYLYQDHALAVLLAGLVDSWRGQ
ELAAPFRKLQQHDKKGLLTRTLSAYLQHFGDQQQCAKALFIHRNTLRYRLERISEITGIE
LQSLDGLLQLYLGEVLSHLEHK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctcgacgccgcgaccgcgcagcagatagtggatcgcaccatgaatatcatc
gaccacaatatcaatgtgatgaacagtcaaggggtgatcctcggctccggcgacaagcag
cggctcaacagtgtccatgaaggcgcccttttggccatagcccaaaaccgcaccgtagtg
atagatgaaggcagtcgccacagcctgcacggcgtcaaacccggggtcaacctgccgctg
cactaccacggcaagataatcggcgttgtcggcattaccggtaatccggcagagctgctg
cactatggtgagctattgaaaatgaccgccgaaatgatggtcgagcaagctaactctctc
gagctggatctctggcataaacgccagcgagaagaatttattctgcaactgctgaaacgg
gacaattatagtgaaagcgatttttgtgcctgggccgcccagctgcagatagatctgcaa
aaacccagagttgctgccgtgatagagctcgccaaaggcgaaaacaaggccacagatctc
aaggagatccaacgcttactcgagtacccccaaagggacaacctggtggccatgaccgcc
atggatcagttggtgatcctcaaacccgcctttctcgatggtcgcagttgggatccggcg
cttgaggatctgcgaatcgagaaactgcttgcccgtttgccggccgacacccagggccgg
ctcaaaatcgcgctggggcatttcttccccggtgaaggcggtattaggcgctcatttcat
accgcgctggaaaccctgagattgggaaagaaacgggcgccggaaaagaccaaatacctc
tatcaggatcacgcgctggcggtattgctggccggactggtcgatagctggcgcggtcag
gagctggcagcgccttttcgcaaactgcagcagcatgacaaaaagggcctgctgacccgc
actctcagcgcctatctgcaacacttcggcgaccaacaacagtgtgccaaggcactgttt
attcatcgtaataccctgagataccgcctggagcgtatcagtgaaatcaccggcatagag
ctgcaaagcctggatggattgctgcaactctacctgggggaagtcctcagccacctggaa
cacaaataa
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